Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02678 ATGCATAAACTAATGCAATCGGAGAGAAAGTCGACCGCGAGAGTGGGGTCATTCCGGCACAGTTTCTTAGAAAGGAGCAAAGAGAAACTCCTCTCCAAGAAGGACTTTAACCTCATTAACGACGACAATGCTGACAACCCCAAACGCTCCTTCCTCGACGCGCTATCTGATCGCGTCGTTAGACTCCGCGATGGCTCCAAAGACTTCGCCTCCAAATTGTACGAGATGGGTCGCAATGACCGACGCAAAGTCGTCTTTGCCATGAAAGCTGGATTATCCTTGGCTATTGTCTCGCTTTTCATATATATCAAGGAGGAACAGCTTAGCAAGTACTCTATCTGGGCCATCCTCACCGTTGTCGTCGTTTTCGAATTCAGCATAGGTGCAACTCTTAACAAAGGGTTCAATCGTGCTTTGGGAACAGTTTCTGCTGGAGTGATTGCTCTGGGAATTGCACAGTTATCCGTGTTGGTTGATTCAACTTTCGAGGAGCTTATTATTGTGTTCTCTATTTTTGTAGCTGGGTTTTGTGCGAGCTTCATGAAGCTGTACCCTGCGATGAAGCAATATGAATATGGCTTTCGTGTATTCTTGTTGACATTTTGTATTGTGTTAGTGTCTGGGAGACACGGGTTGCATTTGTCTACAGCTTTTTACAGATTGATTCTTATTGGTGTTGGAGCTGGTGTAAGTTTGTCTGTGAATATATGCATTTACCCCATCTGGTCTGGGGAGGATCTGCATAAATTGGTGGTGAAAAATTTCAATGGAGTTGCCGCATCTTTAGAAGGTTGTGTAAATGGGTACCTGCAATGTGTTGAATATGAGAGGGTCCCATCCAAAATACTTGTTTATCAAGCTTCCGATGATCCTCTTTACAGTGGTTATAGAACAGCAGTGCAATCGTCAAGTCAAGAGGAGACTCTGGTAGATTTTGCATTATGGGAGCCACCTCATGGTCCATACAAGATGTTCAATTATCCTTGGAGAAGCTACGTCAAAGTCAGTGGAGCATTGAGGCATTGTGCTTTCATGGTCATGGCAATGCACGGATGCATACTTTCAGAAATACAGTCGCCTCCGGAGAAGAGGATAGTTTTCTACGAAGAACTTCAAAGGGTTGGAATTGAAGGAGCTAAAGTCTTGCGGCAACTTGGAAGCAAAGTGGAAAGGATGGAAAAGCTAAGTACCGATGACATTCTCTTAGATGTTCATGAGGCTGCTGAACAATTGCAGATGAAGATTGACCGATTGTCATTCCTCCTAGTGAATTATGAGAGCTGGGAGGAAGCTGCAAAACAGAAGCATAAGGAAAGTGAACAGTCTGAAAATTTGATTGATGTTAAAGACAATGAGAACAAGCAACCTGAGATCACTTCCCTCAGTGAAATAGGGAATGATCCCAAACTCAATATAAGAATCGAGCCTTCCACGCCAGAGTCTCTTCCACAGACCGCGACCAAGAGCTCTCTGTCACGGACACATCTTTCCCTTTTTGGAGATGGCTTAGTAAATGAGCAAGAATCCAAAGTGTACGAAAGTGCCAGCTCCTTGTCTTTGGCAACATTTGCTTCAAACTTGATCGAGTTTGTTGCGAGGCTTCAAAATCTTGTGGATGAATTCCATGATCTTAGCGAGAAGGCAAAGTTTAAAGACCCCCTTGAACAACCCTTGTTGAAGTAG 1683 0.4391 MHKLMQSERKSTARVGSFRHSFLERSKEKLLSKKDFNLINDDNADNPKRSFLDALSDRVVRLRDGSKDFASKLYEMGRNDRRKVVFAMKAGLSLAIVSLFIYIKEEQLSKYSIWAILTVVVVFEFSIGATLNKGFNRALGTVSAGVIALGIAQLSVLVDSTFEELIIVFSIFVAGFCASFMKLYPAMKQYEYGFRVFLLTFCIVLVSGRHGLHLSTAFYRLILIGVGAGVSLSVNICIYPIWSGEDLHKLVVKNFNGVAASLEGCVNGYLQCVEYERVPSKILVYQASDDPLYSGYRTAVQSSSQEETLVDFALWEPPHGPYKMFNYPWRSYVKVSGALRHCAFMVMAMHGCILSEIQSPPEKRIVFYEELQRVGIEGAKVLRQLGSKVERMEKLSTDDILLDVHEAAEQLQMKIDRLSFLLVNYESWEEAAKQKHKESEQSENLIDVKDNENKQPEITSLSEIGNDPKLNIRIEPSTPESLPQTATKSSLSRTHLSLFGDGLVNEQESKVYESASSLSLATFASNLIEFVARLQNLVDEFHDLSEKAKFKDPLEQPLLK 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02678 560 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 4-RELATED 16 557 - -
Cca02g02678 560 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 16 557 - -
Cca02g02678 560 Pfam Aluminium activated malate transporter 75 545 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02678 Cca-Chr2 48163438 48167022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02678 24 556 Miscellaneous Gene Families AT1G25480 60.286 0.0 620
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02678 02 48163438 48167022 Cca02g02678 02 48163438 48167022 ECH