Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02674 ATGGGTTCTCTCCCCAATGCCCCAACCCTATCATTCTCATCCTCACTCTCCGCCACCACTCTCCTCCCATGTCGCCGCTTCACCGCATTCCCTCGCCGCCTCTCTTCCTTCTCCGTGCAAGCCAAGATCCGCGAAATCTTCATGCCCGCGCTCAGCTCCACCATGACCGAGGGCAAAATCGTCTCATGGATCAAATCCGAAGGCGACACTCTCTCCAAGGGCGACAGCGTCGTCGTCGTTGAATCCGACAAGGCCGACATGGACGTCGAGACCTTCTACGACGGCATCCTCGCCGCCATCGTCGTCGCTGACGGCGAGACCGCCCCCGTCGGAGCTCCAATCGGCTTGCTCGTCGATTCCCCCGAAGAAGTCGCAGAAGCCAAAGCCAAAGCCGCCAATTccgctccctctcccgcacccgccgccgctccctccgctccggcGActcctcctccgcctcctccttctcctccGGCGAAGTCCGTTTCTGATGCCCCGACGAAGACCGTGGCCACGCCTCAGGCCAAGAAGCTCGCCAAGCAGCACAAGGTGGACATTGCGAATGTCGTTGGAACCGGTCCGTTTGGGAGGATTACTCCGGCGGACGTGGAGGCTGCTGCCGGAATTTCGCCGTCGAAGAGCAATGTGACTCCGCTGGCAAGTCCTGCTCCGGCGAAAGCTGCTTCTGCCACGCCGTCGCCGGCTCCGATTCCGGGTTCTAGCGTGGTTGCTTTCTCCACGATGCAATCTGCGGTGGCGAAGAACATGGTGGAGAGTCTCTCTGTGCCTACGTTCCGCGTTGGGTACCCTGTGACTACGGATGCGTTGGATGCTCTGTATGAGAAGGTGAAACCGAAGGGTGTGACTATGACGGCTATTTTGGCGAAGGCTGCTGCTATGGCACTTGTTCAGCACCCGGTTGTGAATGCCAGCTGCAAAGATGGCAAGAACTTTGTGTATAACAGTAACATCAATGTTGCTGTTGCTGTGGCTATCAATGGTGGTTTGATCACCCCTGTTCTCCAGGATGCGGATAAGTTGGACTTGTATTTGTTGTCCCAAAAATGGAAGGAGCTAGTGGACAAAGCTCGTGCAAAGCAGTTGCAACCTCATGAGTACAATTCAGGAACTTTCACACTTTCCAATTTGGGTATGTTTGGAGTTGACAGATTTGATGCCATACTTCCACCAGGCCAGGGTGCTATCATGGCTGTTGGAGCATCAAAGCCTACTGTTTTGGCTGCTGCAGATGGATTCTTCAGCGTGAAAAATAAAATGCTGGTTAATGTGACAGCCGATCATCGAATAATTTATGGGGCTGACTTGGCTGCCTTCCTTCAGACATTCTCAAAAATCATTGAAAACCCAGAAAGCCTAACATTGTAG 1386 0.5101 MGSLPNAPTLSFSSSLSATTLLPCRRFTAFPRRLSSFSVQAKIREIFMPALSSTMTEGKIVSWIKSEGDTLSKGDSVVVVESDKADMDVETFYDGILAAIVVADGETAPVGAPIGLLVDSPEEVAEAKAKAANSAPSPAPAAAPSAPATPPPPPPSPPAKSVSDAPTKTVATPQAKKLAKQHKVDIANVVGTGPFGRITPADVEAAAGISPSKSNVTPLASPAPAKAASATPSPAPIPGSSVVAFSTMQSAVAKNMVESLSVPTFRVGYPVTTDALDALYEKVKPKGVTMTAILAKAAAMALVQHPVVNASCKDGKNFVYNSNINVAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVDKARAKQLQPHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVLAAADGFFSVKNKMLVNVTADHRIIYGADLAAFLQTFSKIIENPESLTL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02674 461 Gene3D - 38 143 - -
Cca02g02674 461 MobiDBLite consensus disorder prediction 140 161 - -
Cca02g02674 461 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 170 207 IPR004167 GO:0016746
Cca02g02674 461 MobiDBLite consensus disorder prediction 127 182 - -
Cca02g02674 461 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 68 97 IPR003016 -
Cca02g02674 461 Pfam Biotin-requiring enzyme 45 115 IPR000089 -
Cca02g02674 461 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 7 461 IPR045257 GO:0006086|GO:0045254
Cca02g02674 461 SUPERFAMILY Single hybrid motif 42 137 IPR011053 -
Cca02g02674 461 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 241 460 IPR001078 GO:0016746
Cca02g02674 461 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 4 OF PYRUVATE DEHYDROGENASE COMPLEX, CHLOROPLASTIC 7 461 - -
Cca02g02674 461 Pfam e3 binding domain 170 204 IPR004167 GO:0016746
Cca02g02674 461 Gene3D - 169 207 IPR036625 GO:0016746
Cca02g02674 461 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 164 207 IPR036625 GO:0016746
Cca02g02674 461 SUPERFAMILY CoA-dependent acyltransferases 241 460 - -
Cca02g02674 461 CDD lipoyl_domain 45 117 - -
Cca02g02674 461 ProSiteProfiles Biotinyl/lipoyl domain profile. 43 118 IPR000089 -
Cca02g02674 461 Gene3D - 224 460 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02674 Cca-Chr2 48126753 48132343 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02674 10 461 Acyl Lipid Metabolism Gene Families AT3G25860 73.019 0.0 628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02674 02 48126753 48132343 Cca02g02674 02 48126753 48132343 ECH