Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02673 ATGTTGAGTGTTGAGACGCGCATTTGGTTTTGGCAATGCGTTGAAGAAGAAAAAAGGAATCGATTAAGAATGCCCGAGATGGATGAGCGCGTGGTGATGCAGCAACCTCTGTCTGCCATAGCAGAGGCGTTTGAGGAACTCTCTAAGAGGAACGACGCTCACAGCATTCGCTTGGACACCTTCTGCGAGGCCGCCTCTCTCGTCTCCGTTCTCTTCCGTTGTCTCGGCCTCGCTTTCAAATTCGCTGAATTGGAATACGTTGCCAAGCTACATGGACTATTGGAAGCATCGAAGACATGTCCCACTCTACAGGATATTCTTAACCTTGATGTCGCCAGTGACACAGTGAAAACATCAGGAAGCTCTTCACGTAATCTGCGTAGAGTTCGGCAGGGTCTTGATCTCGTCAGAGCTATATTCGAACAGCTCTTGTCAACTGATGATAATTCTCTGAAAGAAGTGGCTACAGTAGCTTATGGGCAGGTTTGTGCACCATATCACACATGGGCAGTAAGAACAGCTGTGTATGCTGGGATGTATACACTTCCAACGAGAGATCAACTTTTGATGAAGCTCAATGAAACAGAGCAATCAGCCGAGAAGAAGATGAGAAGGTACATTGCTGCCTCACTTCCAATTATAGAATACATCGATAAACTGTACCTTTCTCGAAATATTACGTTGGACTGGTGA 693 0.4618 MLSVETRIWFWQCVEEEKRNRLRMPEMDERVVMQQPLSAIAEAFEELSKRNDAHSIRLDTFCEAASLVSVLFRCLGLAFKFAELEYVAKLHGLLEASKTCPTLQDILNLDVASDTVKTSGSSSRNLRRVRQGLDLVRAIFEQLLSTDDNSLKEVATVAYGQVCAPYHTWAVRTAVYAGMYTLPTRDQLLMKLNETEQSAEKKMRRYIAASLPIIEYIDKLYLSRNITLDW 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02673 230 Coils Coil 185 209 - -
Cca02g02673 230 PANTHER ACD11 HOMOLOG PROTEIN 30 230 - -
Cca02g02673 230 Gene3D Glycolipid transfer protein 29 230 IPR036497 -
Cca02g02673 230 Pfam Glycolipid transfer protein (GLTP) 56 194 IPR014830 GO:0005737|GO:0120009|GO:0120013
Cca02g02673 230 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 30 230 - -
Cca02g02673 230 SUPERFAMILY Glycolipid transfer protein, GLTP 51 229 IPR036497 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02673 Cca-Chr2 48123276 48126045 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02673 33 230 Acyl Lipid Metabolism Gene Families AT4G39670 67.961 4.22e-99 286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02673 02 48123276 48126045 Cca02g02673 02 48123276 48126045 ECH