Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02669 ATGGCTTCTTCTCCAAATCGCTTCGCTGCTCTATTTCTCTTTTCCCTCCTTCTTACTTGCTTCCTACGAGTAGAAGGTAACTCTTCTTATCAAAAAATAGGCCAGGGCTACCGTCTCATATCCATTAAAGATGCCCCTCAATCTGATGGTGCCCTTCAAGGGCTCCTCCAAGTTAACCAGAACAACAATATCTATGGCCCTGACATTCCCCTTTTGCGACTCTATGTCAAGCACGAGACAGAGAACCGTTTGAGGGTACACATCACTGACGCAAAGAACCAAAGGTGGGAGGTTCCTTACAACCTATTGCCAAGAGAGCAACCAGCAAATGTAAAGCAAAACATTGCGTGGTCGAGGAAGAGGAACCTAATAGCAGTGTCAGAGTATTCTTACGATGGATCTGACCTTGTCTTCAGCTACACTTCAGACCCGTTTAGTTTTGCAGTGAAAAGGAAGTCAAATGGGGATACCTTGTTTGACTCAAATACTGACGAGTTTAACACACTGGTCTTCAAGGACCAGTACTTGGAAATTTCTACCAAATTGCCGCAGGATGCTTCTTTGTATGGTTTGGGTGAGAGCACACGCCCACACGGGATCAAGCTGTACCCAAATGACCCTTACACTTTGTACGCCACTGATGTAACAGCCCTTGCACTCAATACTGATTTGTATGGGGAACACCCTGTGTACATGGATCTCAGAAATAAAGGTGGCAAGCCTTATGCACATGGGGTTTTGTTGCTGAATAGCAATGGAATGGATGTCGGAACCTCTCTGACGTATAAGATTATCGGAGGGGTGCTTGATTTTTACTTCTTTGCTGGACCCACGCCTCTGAATGTTGTGGATCAGTACACTTCCTTAATTGGTAGACCAGCTGCAATGCCTTATTGGGCCTTTGGATTCCACCAATGCAAGTGGGGCTATTACAACCTTTCTGTGCTAGAAGATGTTGTCGAAAACTACAAGAAGGCGAAAATCCCACTTGATGTGATATGGAATGATGCTGATCACATGGATGGCCTCAAGGACTTCACACTCAATCCAATTAACTACCCTCGTTCCAAGTTTTTAGAATTCTTGGACAGAATACATGGCATTGGCATGAAATACATAGTAATCGTTGATCCAGGAATTGCTGTTAACTCCAGTTACGGTGTATATCAAAGGGGTATGGCTAATGATGTTTTCATCAAGTATGAAGGGGAACCCTTCGTGGCTCAAGTTTGGCCAGGAATAGTGTATTTCCCTGATTTTCTCAATCCAAAAACAGTTTCCTGGTGGGGTGATGAGATCCGTCGCTTCCATGAACTTGTCCCTGTTGATGGCCTATGGATTGACATGAATGAGATTTCAAATTTCTGCACCGGAAAGTGCAAAATTCCTAAGGGAAGAAAGTGTCCAAGTGGAACAGAACCTTCTGTGTCATGTTGCTTAGATTGCACAACCAACACAAGCACAAGGTGGGATGATCCTCCCTACAAAATTAACGCTTCAGGAGTAGAGGCTCCTATAGGCTCGAGAACCATAGCCACTAGTGCAGTTCACTACAACGGTGTTTTGGAGTATGATGCTCACAGCATTTATGGTTTCTCTGAAGCCATTGCAACTCACAAGGCCCTTCAAGGGCTTCAAGGAAAAAGGCCTTTCATTTTGTCACGCTCCACTTATGTGGGTTCAGGCAAATATGCTGCACATTGGAGTGGTGACATTAGGGCCACGTGGGAGGACTTAAGATACTCGATAACTACAATGCTCAATTTTGGAATATTTGGGGTGCCTATGGTTGGTTCAGACATATGTGGTTTCTTTTCAGTTGAAACCACACCTCATGAAGAGCTCTGCAATCGGTGGATTGAAGTTGGTGCCTTCTACCCTTTCTCAAGGGACCATGCAAATTTTGACTCCCCTAGACAAGAACTTTACCAATGGGAATCAGTGGCTGAATCTGCTAGAAATGCTTTAGGTATGAGGTATAAGCTCCTCCCATATCTATACACCCTTAACTATGAGGCTCATATTAGTGGAGCACCAATTGCAAGGCCTCTTTTCTTCTCATTTCCAACTTGCACTGAATGCTATGGCCTCAGCACTCAGTTCTTAATAGGGAGCAATCTAATGATTTCTCCTGTGCTTGAGCAAGGAAAAACACAAGTCACGGCACTCTTCCCTCCTGGAACATGGTACAGTCTGTTTGATTTAACTCAGACCATTGTGTCAAAAGATGGAAACAATGTTACCCTTGATGCACCTTTGCATGTGGTGAATGTGCATGTGTATCAGAATGCAATTCTTCCCATGCAACAGGGTGGAATGGTCACTAAGGATGCTAGAATGACACCCTTCAGCCTCATTGTGACCTTCCCTGCTGGTGCAACTGAAGGATCAGAAGCCAAAGGGGACCTATTCCTTGATGATGATGAGGTGCCAGAAATGAAGGTTGGAAATGGCTATTCAACCTACGTTGTTTTCCATGCAAGTGTCAAAGAAGGAAAGGTGAAAGTTTGGTCAGAAGTGCAAGAGGGCAAGTTTGCTTTAGACAAAGGTTGGGTTATTGACACTATACAAGTGTTGGGGTTAAAGTCAAACCGAAATGGAACACTTGTACCAGAAATTGAGATTGATGGGAAACCATCAATGGGCGTATCAAAGGTGCAAGTTAGTACAACTCAACAAAAGTACTTATCCGGGCAGGGTGGTGAAGAAAATATATCGATGGTAGGGTTGACGGGATTGAATATTCCTGTAGGTAAAGGATTTGCTGTGACGTGGTAG 2778 0.4417 MASSPNRFAALFLFSLLLTCFLRVEGNSSYQKIGQGYRLISIKDAPQSDGALQGLLQVNQNNNIYGPDIPLLRLYVKHETENRLRVHITDAKNQRWEVPYNLLPREQPANVKQNIAWSRKRNLIAVSEYSYDGSDLVFSYTSDPFSFAVKRKSNGDTLFDSNTDEFNTLVFKDQYLEISTKLPQDASLYGLGESTRPHGIKLYPNDPYTLYATDVTALALNTDLYGEHPVYMDLRNKGGKPYAHGVLLLNSNGMDVGTSLTYKIIGGVLDFYFFAGPTPLNVVDQYTSLIGRPAAMPYWAFGFHQCKWGYYNLSVLEDVVENYKKAKIPLDVIWNDADHMDGLKDFTLNPINYPRSKFLEFLDRIHGIGMKYIVIVDPGIAVNSSYGVYQRGMANDVFIKYEGEPFVAQVWPGIVYFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNEISNFCTGKCKIPKGRKCPSGTEPSVSCCLDCTTNTSTRWDDPPYKINASGVEAPIGSRTIATSAVHYNGVLEYDAHSIYGFSEAIATHKALQGLQGKRPFILSRSTYVGSGKYAAHWSGDIRATWEDLRYSITTMLNFGIFGVPMVGSDICGFFSVETTPHEELCNRWIEVGAFYPFSRDHANFDSPRQELYQWESVAESARNALGMRYKLLPYLYTLNYEAHISGAPIARPLFFSFPTCTECYGLSTQFLIGSNLMISPVLEQGKTQVTALFPPGTWYSLFDLTQTIVSKDGNNVTLDAPLHVVNVHVYQNAILPMQQGGMVTKDARMTPFSLIVTFPAGATEGSEAKGDLFLDDDEVPEMKVGNGYSTYVVFHASVKEGKVKVWSEVQEGKFALDKGWVIDTIQVLGLKSNRNGTLVPEIEIDGKPSMGVSKVQVSTTQQKYLSGQGGEENISMVGLTGLNIPVGKGFAVTW 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02669 925 Gene3D - 662 761 IPR013780 -
Cca02g02669 925 Pfam N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase 53 184 IPR031727 -
Cca02g02669 925 Gene3D glycosyl hydrolase (family 31) 30 292 - -
Cca02g02669 925 CDD GH31_MGAM_SI_GAA 291 674 - -
Cca02g02669 925 SUPERFAMILY Galactose mutarotase-like 48 279 IPR011013 GO:0003824|GO:0005975|GO:0030246
Cca02g02669 925 ProSitePatterns Glycosyl hydrolases family 31 active site. 444 451 IPR030458 -
Cca02g02669 925 PANTHER ALPHA-GLUCOSIDASE 3 925 - -
Cca02g02669 925 Gene3D Glycosidases 293 661 - -
Cca02g02669 925 PANTHER ALPHA-GLUCOSIDASE 3 925 - -
Cca02g02669 925 CDD GH31_N 176 291 - -
Cca02g02669 925 Pfam Glycosyl hydrolases family 31 272 766 IPR000322 GO:0004553|GO:0005975
Cca02g02669 925 SUPERFAMILY (Trans)glycosidases 282 677 IPR017853 -
Cca02g02669 925 Gene3D - 764 925 IPR013780 -
Cca02g02669 925 SUPERFAMILY Glycosyl hydrolase domain 679 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02669 Cca-Chr2 48052087 48058665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02669 29 925 Glycoside Hydrolase AT1G68560 70.843 0.0 1330
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02669 02 48052087 48058665 Cca02g02669 02 48052087 48058665 ECH