Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02659 ATGGCCACTGCTCCTCTCATTCCCGTTTCCTCTTCCTCTTCCTGGTTCCCGCGCCTCTCTTCTCCTTTCAAGGGAACAGTGAAAACCTTGGAGGCAAAACCATGTCTGAAGATTCAGCGAGCAAGACCCCTGGTTTTGGTGGTCAATAAGGTTGCCTCTGCCCCCGTGGCAGCAGCCAGTGTGGGCGTTCGGTTTCGGCTGGACAATTTGGGCCCCCAACCGGGTTCGAGAAAGAAGGCTAAGAGAAAGGGTAGAGGAATATCGGCAGGGCAAGGGGCAAGTTGTGGTTTTGGGATGAGGGGTCAGAAATCTCGATCTGGGCCTGGCGTTATGAAGGGTTTCGAAGGTGGCCAGATGCCACTCTATCGACGAATCCCCAAACTCAGAGGAATTGCAGGAGGTATGCATGCGGGATTGCCCAAATATGTCCATGTAAATCTGAGAGACATAGAGGATGCTAAATTTCAAGAAGGGGACGAGGTGTCTCTAGAGACACTGAAGCAGAAAGGTGTGATTAACCCATCTGGAAGAGAAAGGAGACTTCCTTTGAAGATTTTGGGTGAAGGAGAACTGAGCAAGAAGTTGACACTAAAAGCCCGTGCTTTTTCCACGTCAGCGAAGGAGAAACTTGAGAATGTTGGTTGTTCCCTCACTGTGCTTCCTGGCCGCAAGAAATGGGTTAAGCCATCAGTGTCTAAAAACCTTGCCCGTGCTGAAGAATACTTTGCCAAGAAGCGCGCCGCAGCTGCTACTGAGTCAGTTTCGGCTTGA 771 0.5084 MATAPLIPVSSSSSWFPRLSSPFKGTVKTLEAKPCLKIQRARPLVLVVNKVASAPVAAASVGVRFRLDNLGPQPGSRKKAKRKGRGISAGQGASCGFGMRGQKSRSGPGVMKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVHVNLRDIEDAKFQEGDEVSLETLKQKGVINPSGRERRLPLKILGEGELSKKLTLKARAFSTSAKEKLENVGCSLTVLPGRKKWVKPSVSKNLARAEEYFAKKRAAAATESVSA 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02659 256 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 91 217 IPR021131 -
Cca02g02659 256 PANTHER BNAA06G33230D PROTEIN 20 254 - -
Cca02g02659 256 Gene3D - 142 219 - -
Cca02g02659 256 SUPERFAMILY Ribosomal proteins L15p and L18e 68 219 IPR036227 -
Cca02g02659 256 TIGRFAM rplO_bact: ribosomal protein uL15 67 217 IPR005749 GO:0003735|GO:0006412|GO:0015934
Cca02g02659 256 ProSitePatterns Ribosomal protein L15 signature. 184 214 IPR001196 GO:0003735|GO:0005840|GO:0006412
Cca02g02659 256 Hamap 50S ribosomal protein L15 [rplO]. 67 220 IPR030878 GO:0003735|GO:0006412|GO:0015934
Cca02g02659 256 PANTHER 50S RIBOSOMAL PROTEIN L15 20 254 IPR005749 GO:0003735|GO:0006412|GO:0015934
Cca02g02659 256 MobiDBLite consensus disorder prediction 70 109 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02659 02 47900346 47903947 Cca02g02659 02 47900346 47903947 ECH