Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02655 ATGAGACTGTGGATCCTGCAACCCCAGCCCCAGCGGTACCACTACCCCATAAAGCGGTGGACCCGCATGGACGCGGCCTTCCACCGCCGGAAGGACAAGGTGGTCGTCATAATGGGGGCGACAGGCTCCGGCAAGTCCCGCCTCTCCATCGACCTCGCCACCCTCTTCCCCTTCTCGGAAATCATAAACTCAGACAAAATGCAAGTCTACCGCGGCCTCGACATAACCACCAACAAGATCCCCCACTCCCACCGCCGCGGCGTCCCCCACCACCTCCTCGGCGACGTCGACCCCTCCCACGGGGACTTCTCCCCCGCCGACTTCCGCTGCCGCGGCGCAGACACCATCGCCGACATCAGCGCCCGGGGAAACCTCCCCCTCCTCGTGGGCGGCTCCAACTCCTTCGTCCACGCGCTCCTCGTCCAAAACTTCGACCCTCGCTTCAACGTCTTCCATAGCCAAGCCCTTATATCCTCTCACCTCCGCTACAACTGTTGCTTCCTCTGGGTCGACATAGCCTTCCCTGTCTTATCCCAATACTTGCGCCAACGAGTTGACCAAATGCTTGACTCGGGGATGCTCGACGAGTTGGCTCAGTTCTTCGACCCGGACGCCGCCTCTCGAACCCGGTTCGGCCTCCGAAAGGCCATTGGGGTCCCCGAGTTCGACCGCTTTTTTAATAAATACCTGGGGTCTCATGCTGGCTCCGATCCTCTGCGGGAGCATGCATATAGGGAAGCGGTCAGGGCGATCAAAGATAACACGTGTCAGTTGGCCCAGCGTCAGATTGGGAAGATCGAGCGGTTGAGACGTGCCGGGTGGGACCTACGGAGGATCGACGCTACGGAGGCCCTCACGTCAGGCTCCCATGTATGGGAGAGACAGGTGTTGGAACCAAGCGTGAAGATTGTGAAACGCTTCTTGATGGAGTAG 933 0.6013 MRLWILQPQPQRYHYPIKRWTRMDAAFHRRKDKVVVIMGATGSGKSRLSIDLATLFPFSEIINSDKMQVYRGLDITTNKIPHSHRRGVPHHLLGDVDPSHGDFSPADFRCRGADTIADISARGNLPLLVGGSNSFVHALLVQNFDPRFNVFHSQALISSHLRYNCCFLWVDIAFPVLSQYLRQRVDQMLDSGMLDELAQFFDPDAASRTRFGLRKAIGVPEFDRFFNKYLGSHAGSDPLREHAYREAVRAIKDNTCQLAQRQIGKIERLRRAGWDLRRIDATEALTSGSHVWERQVLEPSVKIVKRFLME 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02655 310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 146 IPR027417 -
Cca02g02655 310 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 174 276 - -
Cca02g02655 310 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 4-RELATED 26 309 - -
Cca02g02655 310 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 26 309 IPR039657 -
Cca02g02655 310 Pfam IPP transferase 68 142 - -
Cca02g02655 310 Pfam IPP transferase 159 263 - -
Cca02g02655 310 Gene3D - 31 308 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02655 Cca-Chr2 47796302 47797637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02655 162 308 C2H2 Transcription Factor Family AT2G27760 34.104 5.99e-18 82.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02655 02 47796302 47797637 Cca02g02655 02 47796302 47797637 ECH