Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02638 ATGGCCTCTAGAGAAGGGAGACGGCATCATCATGATCTTGTGCCTCTTGCTGCATTGCTCAAGAGAGAGATGAAGAGTGAGAAGATGGTGAAGCCTACTGTGAGGTTTGGACATGCAGCTCAGTCCAAGAAAGGGGAGGATTACTTTCTAATTAAGACTGATTGTCAGCGTGTGCCTGGGAACTCTTCATCATCCTTTTCTGTATTTGCGATCTTTGATGGGCATAATGGAAATGCTGCTGCCATTTTTACTAGGGAGCATTTGTTAAATCACGTGTTGGGTGCCCTTCCTCAAGGGCATGGACGAGATGAGTGGTTGCAAGCTTTACCAAGAGCATTGGTTGCCGGGTTTGTTAAGACTGATAAAGAATTTCAGAGCAGAGGAGAAACTTCTGGAACTACGGCCACATTTGTAATAGTGGATAGGTGGACTGTGACTGTTGCATCAGTTGGAGATTCCCGTTGTATACTAGATACCCAGGGTGATGCGGTCACCACCTTAACTGTTGATCACAGACTTGAAGAGAATATTGAAGAGAGGGAACGTGTAACTGCTAGTGGAGGCGAAGTTGGGAGGCTTAGCATTGCCGGTGGTGCTGAGATTGGTCCCCTTCGTTGCTGGCCAGGGGGTCTATGCCTTTCTAGGTCAATAGGAGACATGGATGTTGGAGAATTCATAGTTCCGATACCATATGTCAAACAAGTGAAGCTATCAAAGGCTGGTGGGAGGCTTATAATTGCCTCTGATGGCATATGGGATGCTTTATCGTCAGAAATGGCTGCAAAATCTTGTCGTGGTTTGCGGGCTGAACTTGCTGCAATGCAGGTTGTCAAGGAAGCACTAAGAACGAGAGGGTTAAAGGATGATACCACTTGTATAGTAGTTGACATAATCCCACCTGATAATGAATTGCCTCCTACACCTCCTCCCCCAAAGCGGAACAAGCTGAGAGATCTTCTTTTGTTCCGGAAGAGGTCCCGCGAGTCTGCTAGTAAGCTGTCAAAAAAGCTTTCAGCTATAAATATAGTTGAGGAACTGTTTGAAGAAGGATCAGCAATGCTTGCTGAAAGATTAGGAAATGATGACAACTTGAACTCGGGGCAATCAACATCTGGCCTTTTTGTCTGTGCTGTATGTCAAGTTGATCTTGCTCCAAGTGAGGGCATCTCTGTCCACGCAGGTTCTATCTTCTCCACCAGCTCCAAACCCTGGCAAGGTCCTTTTCTATGTTCTGATTGTCGTGATAAGAAGGATGCTATGGAAGGAAAACGTCCAAGTGGAATCAAGGTGTCATAG 1296 0.4599 MASREGRRHHHDLVPLAALLKREMKSEKMVKPTVRFGHAAQSKKGEDYFLIKTDCQRVPGNSSSSFSVFAIFDGHNGNAAAIFTREHLLNHVLGALPQGHGRDEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGDAVTTLTVDHRLEENIEERERVTASGGEVGRLSIAGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSKAGGRLIIASDGIWDALSSEMAAKSCRGLRAELAAMQVVKEALRTRGLKDDTTCIVVDIIPPDNELPPTPPPPKRNKLRDLLLFRKRSRESASKLSKKLSAINIVEELFEEGSAMLAERLGNDDNLNSGQSTSGLFVCAVCQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCSDCRDKKDAMEGKRPSGIKVS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02638 431 SMART PP2C_4 27 295 IPR001932 -
Cca02g02638 431 Pfam Protein phosphatase 2C 61 282 IPR001932 -
Cca02g02638 431 CDD PP2Cc 36 297 IPR001932 -
Cca02g02638 431 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 2 430 - -
Cca02g02638 431 Gene3D - 33 301 IPR036457 -
Cca02g02638 431 SMART PP2C_SIG_2 30 297 IPR001932 -
Cca02g02638 431 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Cca02g02638 431 PANTHER ALPHABET, ISOFORM E-RELATED 2 430 - -
Cca02g02638 431 SUPERFAMILY PP2C-like 38 297 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02638 Cca-Chr2 47533461 47541133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02638 1 430 PP2C-type Phosphatase Gene Family AT1G68410 78.670 0.0 692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02638 02 47533461 47541133 Cca02g02638 02 47533461 47541133 ECH