Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02621 ATGTTAACGAAAATGTCAACCATGTCCATGTCCTTCCACTCCTCTGCTCTCTGCAAAGGCTCTTCCACCTTCTGCTCCCTCCCACGCGCCGCCGCACCCTTCCGCCTCAGGGCCTTCTCCACCGCCGTCTCCGACAAGCCCTCCGTTTGCACCGCCGACGAACTCCACTACGTCTCCCTCTCCAATTCCGATTGGAAACTCGCTCTCTGGCGCTACAACCCTTCGCCTCTCGCACCTCCGAGGAATCATCCTCTGTTGCTCTTGTCGGGAGTGGGGACTAACGCCATTGGATATGACCTTTCCCCTGAGTCATCATTTGCACGTTACATGTCTGGTGAGGGATTTGAAACTTGGATTCTTGAAGTACGAGGAGCTGGGTTGAGTGTTCAAGGTTCAAATTCCAAAGATATTGAGCAGTCTGCCCTTGCAATGTCTGAGACGATGGAATCTGCTTCAGAAAGTGCAACCAATGGAGCTGTGGTCTCTAACAAAGAATTGAATAACATGTCTTGTGCAGTATCTGAACCTGAGATTTCTGCCCCAAATGGAGTAGAAACTGAGAATGTGGCAGTCAATGGAGACCTTACTAGGTTAGCTACTGTTTGGGATGAATCAAAGTTGGTGGCAAGATTGACTGAGACTTTCATGTTTTTGTCAGAAAGAGTCTCTGGGTTTCTTAGTGAAAGTCAATCGAAGGTCATGTTTTCCAATTTACTAGATCAGATTTCAAAACTTTTGGTGGATTCTCCTTTATATGAACAATTCAATGAGGTGAGGGGAAAGCTTTCAACTCTGTTTGAAACGAAGCAAAACTCTGGTATTACTAGTCAAATAATTGATCTGAATCAAAAACTAGTAAATATTATTGAGGAAGGTCAGCTCTCTGTTTCTCCTCCATTATTTGATCTACAAGCTCGCTTTACTTCTACAATAGAAGATTTTCAAAAGCAACTTGACTTGATAGTGAAGTATGATTGGGACTTCGATCATTACTTGGAAGAAGATGTTCCTGCAGCGATAGAATACATAATGAAACAAAGCATGCCTAAAGATGGAAAATTGCTTGCAATTGGACACTCCATGGGTGGTATCTTGCTTTACTGTATGCTTTCACGGTATGGTTTTGAAGGAAAAGAACCCAAATTGGCTGCAGTAGTTACACTGGCATCGTCTCTGGACTACACATCATCCAAATCAACTCTAAAGTTACTCTTACCCCTAGCAGATCCAGCACAGGCTCTAAATGTCCCTGTTGTTCCTTTAGGGGCAATGCTGGCAGCAGCTTATCCTCTTTCATCTCGTCCACCATATGTATTATCATGGTTAAATACCCTGATTTCAGCTGAGAACATGATGGATCCGGATTTATTAAAAAGACTTGTTTTGAATAACTTCTGCACCATACCCGCAAAACTTATCTTGCAGCTCACTTCAGCATTTCGAGAACGTGGTTTATGTAACAGAAATGGGACTTTTTCTTACAAGGACCATCTACACAAAAGCAATATCCCTATCTTAGCTATTGCTGGAGACCAGGATCTGATTTGCCCACCTGAAGCTGTGGAAGAAACCGCTAAGCTAATTCCTGAGCACCTGGTTACGTATAAAGTTTTTGGAGAACCTGGAGGCCCACATTATGCTCATTATGATTTAGTTGGAGGAAGACTGGCAGTGGAGCAGGTGTATCCCTGTATAATTGAATTTCTTAGTTGTCACGACAAGTGA 1725 0.4354 MLTKMSTMSMSFHSSALCKGSSTFCSLPRAAAPFRLRAFSTAVSDKPSVCTADELHYVSLSNSDWKLALWRYNPSPLAPPRNHPLLLLSGVGTNAIGYDLSPESSFARYMSGEGFETWILEVRGAGLSVQGSNSKDIEQSALAMSETMESASESATNGAVVSNKELNNMSCAVSEPEISAPNGVETENVAVNGDLTRLATVWDESKLVARLTETFMFLSERVSGFLSESQSKVMFSNLLDQISKLLVDSPLYEQFNEVRGKLSTLFETKQNSGITSQIIDLNQKLVNIIEEGQLSVSPPLFDLQARFTSTIEDFQKQLDLIVKYDWDFDHYLEEDVPAAIEYIMKQSMPKDGKLLAIGHSMGGILLYCMLSRYGFEGKEPKLAAVVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAMLAAAYPLSSRPPYVLSWLNTLISAENMMDPDLLKRLVLNNFCTIPAKLILQLTSAFRERGLCNRNGTFSYKDHLHKSNIPILAIAGDQDLICPPEAVEETAKLIPEHLVTYKVFGEPGGPHYAHYDLVGGRLAVEQVYPCIIEFLSCHDK 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02621 574 ProSitePatterns Prolyl endopeptidase family serine active site. 335 365 IPR002471 GO:0004252|GO:0006508
Cca02g02621 574 Gene3D alpha/beta hydrolase 54 144 IPR029058 -
Cca02g02621 574 Gene3D alpha/beta hydrolase 315 571 IPR029058 -
Cca02g02621 574 PIRSF UCP031088_abhydr 2 574 IPR016969 -
Cca02g02621 574 PANTHER LYSOSOMAL ACID LIPASE-RELATED 41 571 - -
Cca02g02621 574 Pfam alpha/beta hydrolase fold 329 548 IPR000073 -
Cca02g02621 574 SUPERFAMILY alpha/beta-Hydrolases 56 128 IPR029058 -
Cca02g02621 574 SUPERFAMILY alpha/beta-Hydrolases 324 570 IPR029058 -
Cca02g02621 574 PANTHER - 41 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02621 Cca-Chr2 47368983 47375362 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02621 02 47368983 47375362 Cca02g02621 02 47368983 47375362 ECH