Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02616 ATGGCGTCGCGGGGTTGGTTTTCTTTCCGAACATTTTTCCCATCGTTTCAGGGAGGGATGAGGCAGCAAGTTGATCCTGCGGCTCATACAATCAAGTCTCATGGAGCCGCACTTGCAAGAAATCACGTTCGTGATTGGTTTATATTGGTGCTTCTCATAGTAATAGAGGTTGTCCTTTTTGTCATTCATCCATTTTACCGTTTTGTGGGAAGGGACATGATGGAAGACCTTAAATATCCTTTGAAAGACAACACGGTGCCCGTATGGGCTGTTCCTTTATACGCGGTTCTGTTGCCAATGGCCGTTTTCCTTCTCTTCTATATGCGCAGGAGAGATGTTTATGATTTGCACCACAGTGTTCTAGGTTTGCTATTTGCTGTTCTGATCACTGGGGTCTTGACCGATGCAATAAAAAATGCAGTTGGCCGGCCTCGGCCAGACTTCTTTTGGCGTTGCTTCCCCGATGGGGTAGAGGCTTATGATAAATGGGGAGGTGTGGTATGTCATGGCAAGGAAAGCGATATAAAAGAAGGACACAAGAGTTTCCCAAGCGGCCATACATCATGGTCCTTTGCAGGCCTAGGTTTTCTCTCTCTGTACCTATCCGGAAAAATTAAAGCTTTTGATCGCAAAGGACACGTGGCAAAGTTGTGCATTGTGTTTCTTCCTCTACTTGTTGCTTGCTTAGTTGGAATCTCTCGAGTGGATGACTATTGGCACCATTGGCAAGATGTATTTGCCGGAGGTCTTCTAGGTTTGTTATTGTTGACTTCAAAATCGAAGTTGTAA 789 0.4525 MASRGWFSFRTFFPSFQGGMRQQVDPAAHTIKSHGAALARNHVRDWFILVLLIVIEVVLFVIHPFYRFVGRDMMEDLKYPLKDNTVPVWAVPLYAVLLPMAVFLLFYMRRRDVYDLHHSVLGLLFAVLITGVLTDAIKNAVGRPRPDFFWRCFPDGVEAYDKWGGVVCHGKESDIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIKAFDRKGHVAKLCIVFLPLLVACLVGISRVDDYWHHWQDVFAGGLLGLLLLTSKSKL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02616 262 SMART acid_phosph_2 120 260 IPR000326 -
Cca02g02616 262 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 42 256 IPR036938 -
Cca02g02616 262 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 42 258 - -
Cca02g02616 262 Pfam PAP2 superfamily 120 256 IPR000326 -
Cca02g02616 262 CDD PAP2_containing_1_like 77 247 - -
Cca02g02616 262 PANTHER LIPID PHOSPHATE PHOSPHATASE 17 255 IPR043216 GO:0006644
Cca02g02616 262 PANTHER LIPID PHOSPHATE PHOSPHATASE 1 17 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02616 Cca-Chr2 47328120 47333294 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02616 17 255 Lipid Metabolism Gene Families AT2G01180 72.803 3.36e-133 377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02616 02 47328120 47333294 Cca02g02616 02 47328120 47333294 ECH
Cca02g02616 02 47328120 47333294 Cca07g02483 07 53602849 53607307 ECH