Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02608 ATGGAGAAGGTTTGTGAATTCTGCACAGCTTTGAGGCCACTTGTTTACTGCAAGGCTGATGCAGCATATCTTTGCCTATCTTGTGATGCGAAGGTGCATTTGGCAAATGCATTGTCTGGCCGGCACCTCCGGAACCTTGTGTGTAACTCATGCGGATACCATCTTGCTTATGTTCTGTGTTTGGACCACAAAATGTTAATCTGTAGAGACTGCGATCAAAAGTTGCACAATGTTTCTTTGCCACATCAGAAACGAGCTATCAGAAGTTTCATGGGGTGCCCTTCTGCTAAAGACTTTGCAGCACTTTGGGGCCTTGAATTGAATGAGATTGAAAACTGTTCCAGTCAGGATCAGTTTGATTCGGTTTCTTGTGTTTCTGCCGATATGAATGTGGCACAATTCTCAGGAAAGCCTGCCACAAAAACTGGGGTCCCTTCAATGAAATCTAGGGCCAAACTTGATGGGGGATCCGCTGGTCAACAAGGTCAGATATTGTACAGTGATCAAGAACGACAAACTATTGTGCAGCAGATTATTGATTTAAAATGGCTTCAACTGAATGAGGGGATTGATTATTCTGCAAAGATCAATAGGCTACAAGAAAAAAAATTATCTCCTTCAGTATATCACACTCTTAAGAAATTGGACGAAAAATTCAACGAGCAAGCACAAAATCCTCAGGATCTTGCTACTAATGTTCTGGAAAATGAGTGTTCCATTGCGCAGCTGAATCCTGAAACTTTGCCTTCAACGTTTTCTCAACTTGATAATTTATCTTCTTCTGCAATTGTCGATCTTCCCTTGCATGGAGAGTTGTTTTGGACATGCAAAAGTCCACTCCGAAGTAATCAGTTGTGGTCCCAAAATATTCAAGACCTCGGGATATGTGAAGAACTCGTTTGGCAAGATGATTTTAACATACCTGATGTTGACTTAAGTTTCCAAAACTTTGAAGAACTATTTGGAGTAGATCAAGATCCAGTTAGTATACTGCTTGATGATCAAGATGTCTCCTGCTCTTCTTTAGAGAAGGATAAGTCAGTTGACAAGTCAGATATTGAAAATCCAAATACAATGGAGGATTCTTCAGCAGCTGCATTCATTACTGTCTCCCAATCCGATAATGAGAACAAGGATATGAATCATCTCAACCAGTACTGTCCAAGAAGCATGGATACAATTCAACCATTCTCTGTTTTGAGATTCAATGCAGAAAGCAGTTGCACTGACCATGATGACAGTGCTCTTTCTCCCTACAGTGAAGGGAAGGCTTATTCAAGTAGTTAA 1287 0.4079 MEKVCEFCTALRPLVYCKADAAYLCLSCDAKVHLANALSGRHLRNLVCNSCGYHLAYVLCLDHKMLICRDCDQKLHNVSLPHQKRAIRSFMGCPSAKDFAALWGLELNEIENCSSQDQFDSVSCVSADMNVAQFSGKPATKTGVPSMKSRAKLDGGSAGQQGQILYSDQERQTIVQQIIDLKWLQLNEGIDYSAKINRLQEKKLSPSVYHTLKKLDEKFNEQAQNPQDLATNVLENECSIAQLNPETLPSTFSQLDNLSSSAIVDLPLHGELFWTCKSPLRSNQLWSQNIQDLGICEELVWQDDFNIPDVDLSFQNFEELFGVDQDPVSILLDDQDVSCSSLEKDKSVDKSDIENPNTMEDSSAAAFITVSQSDNENKDMNHLNQYCPRSMDTIQPFSVLRFNAESSCTDHDDSALSPYSEGKAYSSS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02608 428 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 402 - -
Cca02g02608 428 CDD Bbox1_BBX-like 4 44 - -
Cca02g02608 428 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Cca02g02608 428 SMART bboxneu5 48 87 IPR000315 GO:0008270
Cca02g02608 428 SMART bboxneu5 1 47 IPR000315 GO:0008270
Cca02g02608 428 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 402 - -
Cca02g02608 428 MobiDBLite consensus disorder prediction 408 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02608 Cca-Chr2 47254484 47261373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02608 1 329 C2C2-CO-like Transcription Factor Family AT1G68190 37.048 1.69e-62 204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02608 02 47254484 47261373 Cca02g02608 02 47254484 47261373 ECH