Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02598 ATGAAAACAATGGCTGCCATCACATTCTCATATCCAGCATGTACCTACCTTGTAAGGTGCTGTTCCATGAGAGAAAACCATGACAAGCTTAAGCAGCAACTGAACAGCAGCATCAGAACTAATGGGAGTTTCAGGTCGCCAGTTAAAGTTGAGTCACTGGGCCAAAGTACAGCTTCAACTATCACCACTCTTGGTCAAGCTGTCACAGTTGGTGAAAATGGTCTGCGCCAAAACATCCCAACAAAGAAGCAATTGGTTGATCCTCATCGTCAAGGGCTCATCATTGAAGGTGGAGTTGGTTATAGACAGACTGTTGTCATTAGGTCCTATGAAGTTGGAGCTGATAAAACTGCCACACTTGAGAGCATCCTCAATCTTCTTCAGGAAACAGCACTAAATCATGTTTGGATGTCTGGACTGCTCGGTGATGGGTTTGGGGCAACTCATGGAATGGTGAGGAACGATCTCATTTGGGTTGTCTCAAGAATGCAAGTTCTGATTGATTACTATCCCATCTGGGGAGAGGTAGTTGAAATTGACACATGGGTTGCAGCATCAGGCAAGAATGGAATGAGGCGAGACTGGTTGATAAGAAGCCAAGCCACAGGCCACATTTTCGCACGTGCAACAAGCACGTGGGTGATGATGAACCGTAAAACAAGACGTCTCTCCAAAATGCCTGAAGAGGTGAGAGCAGAAGTTTCACCTTGGTTTATAGAGAAGCAAGCAATTAAGGAAGATGTTCAAGAAAAAATAGTCAAATTGGACAAAGAGGCGAAGTACATGAATTCTGACTTGAAGCCCAAGAGAAATGATTTGGACATGAACCAACATGTTAATAATGTGAAGTATGTAAGATGGATGCTAGAGACCATCCCTGACCAAATTCTTGAGGGGCACCAATTATCTGGTATCACACTAGAGTACAGAAGGGAATGTGGAAGCTCAGATATAGTTCAATCACTATGTGAACCTGAAGAAGATGAAATACTTCATGGTGTGGCAGAACCAGATTACTGCACAAATCTGCTTAATGGATTATCATTGGCATCATCAGATATTATTAATGGTAGTGGAGTCTTGACTTGCCTTGAACATAGGCCAATGAGGTATACACACCTTCTACAAATCAAAGGAGAGAAACAAAATGATGAAATTGTTAGAGGAAGGACTACATGGAAGAAGAAGATAATGCCATTTTCCACTTAG 1209 0.4243 MKTMAAITFSYPACTYLVRCCSMRENHDKLKQQLNSSIRTNGSFRSPVKVESLGQSTASTITTLGQAVTVGENGLRQNIPTKKQLVDPHRQGLIIEGGVGYRQTVVIRSYEVGADKTATLESILNLLQETALNHVWMSGLLGDGFGATHGMVRNDLIWVVSRMQVLIDYYPIWGEVVEIDTWVAASGKNGMRRDWLIRSQATGHIFARATSTWVMMNRKTRRLSKMPEEVRAEVSPWFIEKQAIKEDVQEKIVKLDKEAKYMNSDLKPKRNDLDMNQHVNNVKYVRWMLETIPDQILEGHQLSGITLEYRRECGSSDIVQSLCEPEEDEILHGVAEPDYCTNLLNGLSLASSDIINGSGVLTCLEHRPMRYTHLLQIKGEKQNDEIVRGRTTWKKKIMPFST 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02598 402 CDD 4HBT 101 217 - -
Cca02g02598 402 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 14 397 - -
Cca02g02598 402 Gene3D Hotdog Thioesterase 94 400 - -
Cca02g02598 402 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 14 397 IPR045023 GO:0006633|GO:0016297
Cca02g02598 402 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 100 247 IPR029069 -
Cca02g02598 402 Pfam Acyl-ACP thioesterase 100 394 IPR002864 GO:0006633|GO:0016790
Cca02g02598 402 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 261 393 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02598 Cca-Chr2 47097926 47100916 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02598 85 396 Acyl Lipid Metabolism Gene Families AT1G08510 48.254 3.55e-99 300
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02598 02 47097926 47100916 Cca02g02598 02 47097926 47100916 ECH