Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02596 ATGGCGCTAGAGAATCACATAACGAAGGCGGTGAATGTGCTTCGAAGCAGGATCTGTGACCCCAAGTTCATCTTCTCCAACGATTCTCCAGACAGCAACTACAGCAAACTGAAATTCATGATATCGAGTTCGGTCACGGAGGCGTGCAATAACTCTATTCTTCTTCTCGGTCCCCGTGGCTCCGGCAAGAACGCGGTTTTGGAGCTTGTCATTCAAGATTTGCTGCAACAGTATCCGGACTCGATTTCAGTGATCAGGTTAAACGGACTTTTACATAGTGATGACATCTCTGCATTCAAGGAAATGGCTAGGCAGTTATGTATGGAGCATCAATTGTTGTTTTCCAAAGCGGCATCATTTGATGACAACTCCCAATTTATGGTGGCCATGCTAAAGGAATGTGGATTGGCACATAAAACAGTAATTTTTGTTCTGGATGAGTTTGACCTCTTTGCTAAGGGAAAACAGCGGTTACTTTATAGTTTGCTAGATGCAATGCAATCAATAACATCACAGGCTGTTGTACTTGGCATTAGTTGCCGTCTGGATGCAGATCAGCTGTTGGAGAAAAGAGTACGATCTCGTTTTTCACATAGAAAGCTGTTGTTCTTACCCCCTTCCATGGAAGATTCACAGAGCTTACTGGTGCGCATGCTGACATTACCAATTGATTCAAGCTTCCCACATGATTATGCTGTTGAATTTAACAAAAACGTCCGAAATATTATAGAAGATAGAAGGTTCAAAGAAACCCTCAATAAATATTTAAATATTGACTCCTCTGTCAAAGATTTGCTGAGGTTTCTATTTTGTGCAGTCTCTCATATGGATTTGCAGACTGGGTTCCTGTCTCGGGAGAACTTTGAAGTTGCATTTTCAAGTATCCAGAGGCATCCCAAATTGGAATTTTTAAGAAATTGCTCCGAATTAGAACTTTATATATTGGTTTGCATGAAGAGTTTGGAACTTAAAGAGCAAAGTTTATGCAACTTCAATTCTGTAATGAAAGAGTATAAAAGTGTACATGATTCCTTCCAGACTTCTAGAAATGCTTGCTTAAGGGCATTTGAACACCTTATACATCGTGAATTGATATGTTTCACGGACAATAGAGGACAGAGTTTGTCTGTTGAATTTCGTCCTGTAAAGCTTCTAATTTCACCGGCGGAACTACATCAGGGCATAGGAGCCAACAATTCATGCCCTCCTAAGCTTAAAAGGTTCATGGATCGTGAAGGCATCATTTGA 1248 0.4071 MALENHITKAVNVLRSRICDPKFIFSNDSPDSNYSKLKFMISSSVTEACNNSILLLGPRGSGKNAVLELVIQDLLQQYPDSISVIRLNGLLHSDDISAFKEMARQLCMEHQLLFSKAASFDDNSQFMVAMLKECGLAHKTVIFVLDEFDLFAKGKQRLLYSLLDAMQSITSQAVVLGISCRLDADQLLEKRVRSRFSHRKLLFLPPSMEDSQSLLVRMLTLPIDSSFPHDYAVEFNKNVRNIIEDRRFKETLNKYLNIDSSVKDLLRFLFCAVSHMDLQTGFLSRENFEVAFSSIQRHPKLEFLRNCSELELYILVCMKSLELKEQSLCNFNSVMKEYKSVHDSFQTSRNACLRAFEHLIHRELICFTDNRGQSLSVEFRPVKLLISPAELHQGIGANNSCPPKLKRFMDREGII 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02596 415 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 240 IPR027417 -
Cca02g02596 415 Pfam AAA ATPase domain 35 168 IPR041664 -
Cca02g02596 415 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 216 393 IPR032705 -
Cca02g02596 415 PIRSF ORC4 2 415 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Cca02g02596 415 Gene3D - 31 205 IPR027417 -
Cca02g02596 415 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 7 412 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Cca02g02596 415 CDD AAA 51 199 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02596 1 410 Core DNA Replication Machinery Family AT2G01120 62.884 0.0 537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02596 02 47081109 47085126 Cca02g02596 02 47081109 47085126 ECH