Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02595 ATGGGATTGGTAACGACCACCGTTCCTATGAATATCGTTCCTCAATTCGGGTCGCTCCGAACTTCTATTCGGGTCGAAAATACACCCGGGTTGAGTTTCCCTCTCTCACGGTCACGGAGGAGGAGGAATAGGAGCTTTCTCTGCTTCGCCGTCGATGACGACCTCAGAGAGAAGCAACAGGACTTGACTACTACCGCAACTGGGCTGGGCTCCGCCCTTGAAGAAAGGCCCGAAAACACAGATCTTTTTGAGAGTACAGCTGAAGAAACGCAGGGAAATTTTGAGCAAGATGGTGATCGAAGTCCTATCTATGATTTTCTTTATCCAAGTAAAGAGCTTCTTCCTGATGACAAAGAAATGAGCATATTTGATCATCTTGAAGAGCTGCGACAGAGAATATTTGTATCCGTTCTAGCAGTTGGAGCGAGCATTTTGGGATGCTTTGCATTTTCAAAAGAACTGATAATGGTTCTCGAAGCTCCTGTTAAATTACAGGGTGTAAGATTTCTTCAGCTAGCTCCTGGTGAATTTTTCTTCACAACATTGAAGGTGTCTGGATACTGTGGCCTTCTCTTGGGAAGTCCTATCATCCTCTACGAAATCATAGCTTTTGTACTTCCAGGACTTACAAAAGCTGAAAGAAGGTTTCTAGGGCCAATTGTTTTAGGCTCATCAGTTCTTTTCTACGCCGGAATAACCTTCTCCTACTTAGTTCTGACACCTGCAGCATTAAACTTCTTTGTTAACTACGCTGAAGGTGCTGTTGAATCATTGTGGTCCATTGATCAATACTTTGAATTTGTTCTGGTGCTTATGTTCAGTACAGGCTTATCTTTCCAGGTACCTGTCATACAATTTCTATTGGGACAACTTGGACTTGTGTCCGGAGACCAGATGCTGTCAATTTGGAGGTACGTTGTGGTTGGTGCAGTAGTGGCAGCTGCTATAGTTACGCCATCCACTGATCCTCTCACTCAAGTTCTTCTAGCGGCACCCTTATTGGGTCTTTACCTAGGTGGCGCATGGATGGTCAAGCTTACTGGACGGTGA 1050 0.4486 MGLVTTTVPMNIVPQFGSLRTSIRVENTPGLSFPLSRSRRRRNRSFLCFAVDDDLREKQQDLTTTATGLGSALEERPENTDLFESTAEETQGNFEQDGDRSPIYDFLYPSKELLPDDKEMSIFDHLEELRQRIFVSVLAVGASILGCFAFSKELIMVLEAPVKLQGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVLPGLTKAERRFLGPIVLGSSVLFYAGITFSYLVLTPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQLGLVSGDQMLSIWRYVVVGAVVAAAIVTPSTDPLTQVLLAAPLLGLYLGGAWMVKLTGR 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02595 349 PRINTS Bacterial Sec-independent translocation TatC protein family signature 121 148 IPR002033 GO:0016021
Cca02g02595 349 PRINTS Bacterial Sec-independent translocation TatC protein family signature 195 213 IPR002033 GO:0016021
Cca02g02595 349 PRINTS Bacterial Sec-independent translocation TatC protein family signature 213 239 IPR002033 GO:0016021
Cca02g02595 349 PRINTS Bacterial Sec-independent translocation TatC protein family signature 264 292 IPR002033 GO:0016021
Cca02g02595 349 ProSitePatterns TatC family signature. 264 283 IPR019820 -
Cca02g02595 349 Hamap Sec-independent protein translocase protein TatC [tatC]. 117 349 IPR002033 GO:0016021
Cca02g02595 349 TIGRFAM tatC: twin arginine-targeting protein translocase TatC 122 337 IPR002033 GO:0016021
Cca02g02595 349 Pfam Sec-independent protein translocase protein (TatC) 124 332 IPR002033 GO:0016021
Cca02g02595 349 PANTHER BNAA06G35150D PROTEIN 58 349 - -
Cca02g02595 349 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC 58 349 IPR002033 GO:0016021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02595 02 47077242 47080285 Cca02g02595 02 47077242 47080285 ECH