Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02574 ATGAAGTCCTTTTCCTTCAATGCCTTGTTCCTCTTCATCGTGTCACTGTTCCTCAGCTCCATTTCAGCTTTTTCTCCAACTGGCTCCATTCGCCACCCCGTCAAGTTTATCATAGGAGAGGGAGAAGAGAATTTGGGTCCATGGAAGAGTGAATTTGCCCGGGTGGCTCCAGCACCAGGGCCTAAGGGTGAGGATGTTCTTATCCTGGCGGCTAACAGGACCAAAAGGCCTGACATTCTGCGAGGATTTCGACGCTACCAAGGTGGCTGGGATATTGCAAATCAGCATTATTGGGCTTCAGTTGGATTCACTGGTGCGGCTGGTTTTATTCTTGCTGTCCTGTGGTTTATCTCATTTGGCTTGGCGCTTGGGATACATCTATGCTGCGGATGGGGAATTAACATCAAGGACAAAGGATCAAATCGTTCACAAAGGATTTGTCTCATACTGCTTATATTGTTCACTTTTGCTGCAGCGACTGGATGTGTCCTCCTTTCTGTTGGGCAAGATAAATTCCATGGTCAAGCGTTGGATACCCTCCATTATTTTGTCAATCAGTCAGATTATACAGTACAGACTCTAAGAAATGTCACAGAGTATCTCTCCCTTGCAAAAACTATCAATGTCACCCAGATTCTTCTCCCATCTGATGTCATGGATGGTATTGACAAGCTCAATCTGGATCTAAATACTGCAGCAAACACACTTTCTGAGAAGACAAATGAAAATTCAGTTAAAATTCGAAGAGTATTCAATGACGTGCGGACAGCTTTGTTTGTTGTGGCAGCTGTGATGCTTCTTCTGGCTCTTGTTGGACTACTCCTGTCTGTCCTTGGATATCAACATGCAATCCTCATATTTGTTATCTCTGGATGGTTACTGGTTGCAACCACATTCATTCTTTGTGGAGTATTCATGATCCTTAATAATGCAATTTCTGATACCTGTATGGCTATGGGAGAATGGGTAGCAAATCCTCACACCGAATCTGCTCTTAGTAATGTCCTTCCGTGTGTTGATCAGACAACCACAAACAAAACACTATTTCAAAGTAAACAAGTGGTCACCAATATTGCGAGTGTTGTCAATCAGTTCATCTATAACACTGCAAACTCAAATTCAACACAAGGTAGTCTGGGGTACTACAATCAGTCTGGGCCTAGAATGCCATCTTTATGCTACCCTTTTGACTCTCAGCTTCAAGAGCGTCAATGTACAGATCAAGAAGTTTCTTCCGCCAATGCTTCAATGGTTTGGAAGAACTATGAATGTGAGGTATCTGAATATGGTATTTGCACCACAGTTGGCAGGGTGACCCCCGATATTTACTTGCAGTTAGTAGCTGCAGTGAACGAAAGCTATGCATTAGAACATTATACTCCACCTTTACTTAGCCTTCAGAATTGCAATTTTGTGAGGGACGCCTTCACAGGAATCACTTCAAGCTACTGTCCTCCATTGAACCATTACCTTAAGATTATTAATGTAGGACTTGGCCTAGTTTCCGTTGGTGTTCTACTTTGCCTTGTTCTCTGGATACTCTATGCAAACCGCCCCCCAAGGAGGGAAGTGTTTGAGAAGTCATCCTTACCAGAAACAACCACAACTTTACCCTTGTCAAATGCAAATAGTCAAGTATAG 1641 0.4314 MKSFSFNALFLFIVSLFLSSISAFSPTGSIRHPVKFIIGEGEENLGPWKSEFARVAPAPGPKGEDVLILAANRTKRPDILRGFRRYQGGWDIANQHYWASVGFTGAAGFILAVLWFISFGLALGIHLCCGWGINIKDKGSNRSQRICLILLILFTFAAATGCVLLSVGQDKFHGQALDTLHYFVNQSDYTVQTLRNVTEYLSLAKTINVTQILLPSDVMDGIDKLNLDLNTAANTLSEKTNENSVKIRRVFNDVRTALFVVAAVMLLLALVGLLLSVLGYQHAILIFVISGWLLVATTFILCGVFMILNNAISDTCMAMGEWVANPHTESALSNVLPCVDQTTTNKTLFQSKQVVTNIASVVNQFIYNTANSNSTQGSLGYYNQSGPRMPSLCYPFDSQLQERQCTDQEVSSANASMVWKNYECEVSEYGICTTVGRVTPDIYLQLVAAVNESYALEHYTPPLLSLQNCNFVRDAFTGITSSYCPPLNHYLKIINVGLGLVSVGVLLCLVLWILYANRPPRREVFEKSSLPETTTTLPLSNANSQV 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02574 546 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 7 536 IPR040283 -
Cca02g02574 546 Coils Coil 222 242 - -
Cca02g02574 546 PANTHER TRANSMEMBRANE PROTEIN 7 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02574 Cca-Chr2 46868793 46873388 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02574 02 46868793 46873388 Cca02g02574 02 46868793 46873388 ECH