Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02566 ATGCTTGTTTTAAGGTCAATGGATTTCTCTCGCTATTTTTTTTGGTTCATATTCTCATCTCAGTTTGTTGTTTGCCTTCTTTTATACTTTTCTAAATTACTAATCCATCCTCTGTTATCTTTATCAGATCTGTCCCACGTTTTCTCATCTGTTAGTAGAGACCTCAATTTTATTGATCACACTGGTGACCTGGGATGGAAAGAGGGTGATAGATTCCAGCCTATTGTAGTTGACCCGGGGCTATACTTAGCTCGGAAAAGTCAGATTTTTCAAGCTACAGAGAAGCGGCCTACACCTGACGCGTTCAAACTCTTCACAGGTTCACCATGGGTCATTTTGAGCCGACCCTTCTTAGAGTTCTGCATTTTTGGTTGGGACAATTTACCACGGACACTACTCATGTATTTTACAAATGTGAAGTTATCTCAAGAAGGCTACTTTCACACAGTCATTTGCAATGCACCAGAATTTAAGAACACAACAGTAAATGGCGACTTACGGTACATGATCTGGGACAACCCTCCAAAGATGGAACCTCACTTCCTTAATGCCTCCGTTTACAATCAGATGGCAGAAAGTGGAGCTGCCTTTGCAAGACAGTTTCAACTTAACAATCCTGTGCTGGACATGATTGATGAAAAGATCCTGCGACGTGGTCGCCATCGAGCGGCTCCAGGGGCGTGGTGCACTGGGAGGAGGAGCTGGTGGGCGGATCCATGCTCCGAGTGGGGTGATGTCAATATTGTGAAGCCTGGTCCTCAGGCTAAGAAGCTTGAAGGGTCTGTTTCTAGCCTTCTTGATGACTTGAACTCACATGCCAATCAGTGCCAGTGA 834 0.446 MLVLRSMDFSRYFFWFIFSSQFVVCLLLYFSKLLIHPLLSLSDLSHVFSSVSRDLNFIDHTGDLGWKEGDRFQPIVVDPGLYLARKSQIFQATEKRPTPDAFKLFTGSPWVILSRPFLEFCIFGWDNLPRTLLMYFTNVKLSQEGYFHTVICNAPEFKNTTVNGDLRYMIWDNPPKMEPHFLNASVYNQMAESGAAFARQFQLNNPVLDMIDEKILRRGRHRAAPGAWCTGRRSWWADPCSEWGDVNIVKPGPQAKKLEGSVSSLLDDLNSHANQCQ 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02566 277 Pfam Core-2/I-Branching enzyme 37 190 IPR003406 GO:0016020|GO:0016757
Cca02g02566 277 PANTHER GLYCOSYLTRANSFERASE 36 277 IPR044610 GO:0015020
Cca02g02566 277 PANTHER OS01G0121800 PROTEIN 36 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02566 Cca-Chr2 46797027 46802517 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02566 34 277 Glycosyltransferase AT1G71070 72.951 1.54e-141 402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02566 02 46797027 46802517 Cca02g02566 02 46797027 46802517 ECH