Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02560 ATGGGTGCTCTTGATTTCCTTTCAGATTACTTCTCAGTTTCCACCCCTAAAAAGAAACGCAAACCAATGCAGACAGTTGAAATCAAGGTGAAAATGGACTGTGACGGCTGTGAAAGAAGAGTTCGGAATTCTGTTTCCAACATGTCAGGTGTGAAACAAGTAGAGGTGAATAGAAAGCAAAGCAAGGTAACAGTGACAGGTTACGTGGACAGAAACAAGGTCCTAAAGAAAGTGCAAAGCACTGGAAAGAGAGCAGAGTTTTGGCCCTATATTCAGTACAACTTGGTGGCATATCCCTATGTGGCACAGGCATATGACAAGAAGGCACCCTCTGGCTATGTCAAAAACACCGAACAAGCACTCCCAAACCCAAACGCACCTGATGAGAAACTCACCTCCCTCTTCAGTGATGACAACCCTAATGCATGTTCGATCATGTAA 441 0.4422 MGALDFLSDYFSVSTPKKKRKPMQTVEIKVKMDCDGCERRVRNSVSNMSGVKQVEVNRKQSKVTVTGYVDRNKVLKKVQSTGKRAEFWPYIQYNLVAYPYVAQAYDKKAPSGYVKNTEQALPNPNAPDEKLTSLFSDDNPNACSIM 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02560 146 MobiDBLite consensus disorder prediction 118 146 - -
Cca02g02560 146 Pfam Heavy-metal-associated domain 29 83 IPR006121 GO:0046872
Cca02g02560 146 Gene3D - 10 89 - -
Cca02g02560 146 ProSiteProfiles Heavy-metal-associated domain profile. 32 87 IPR006121 GO:0046872
Cca02g02560 146 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 146 IPR045181 GO:0046872
Cca02g02560 146 SUPERFAMILY HMA, heavy metal-associated domain 22 89 IPR036163 GO:0046872
Cca02g02560 146 MobiDBLite consensus disorder prediction 129 146 - -
Cca02g02560 146 PANTHER HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN 2 146 - -
Cca02g02560 146 CDD HMA 27 86 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02560 Cca-Chr2 46746589 46748218 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02560 02 46746589 46748218 Cca02g02560 02 46746589 46748218 ECH