Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02559 ATGACTAAAGAAGAGGACTTTAAGCTCCTTAAAATCCAGACTTGTGTTCTCAAAGTGAACATTCACTGTGATGGCTGTAAGCAGAAAGTGAAGAAACTCCTTCAGAGAATTGAAGGTGTTTATCAAGTTCAAATAGATGCAGAACAGCAGAAAGTTACAGTTTTAGGAAGTGTGGATTCTGCAACTCTGATCAAGAAACTCGTTAGAGCTGGTAAATATGCTGAACTCTGGTCTCAGAAAACAAACCAGAACCAAAAGCAGAAGAACAACAATGCCAAGGATGAGAAAAATAAAGGGCAAAAGCAAGGACTCCCCAAGGGGATTGAGGCCTTCAAAAACCAGCATCAAAAGTTTCCTGCTTTTAGTTCTGAGGAGGATGAATACTACTTcgaaaccgatgaggaggacgaagatgaagacgaagaGATGCGGATGCTCAGGGAGAAAGCCATTCAGATGAAAATGCTCAAGCATCAACCTCCCAATGCAAACAATGTGAGAAAAGGCATGGGAAGCATTTCAGCAGGTGCCAATAATGGTAAGATGAACAATGCTTGCAATGCCAATAGTGGTAAGAAAGGAGGTCCAAATCATAATATGGCTATGAAGGACAATCCTAATGGGCTTGATCAGAAAACCATGGCAGCTCTTAAATTAAACAATGCCCACCTGAATGGTGAAGGCCTTAACCTCAACCTTGGTGAAGCCAAAAGGGCCAATGACATTGGTGCTATGATGAATCTAGCTGGTTTTCATGGTAATGGTGCAAATGTTGGTAGTGCTACTGTTCTAGGTGGCAATAATTCCAATGGTTTTGGAGGTTTTCCTGTTCAGTCCAATAACATGATTCCAGGGTCTTCTGCAGCTTTTCCAAGTGGTGGTCTTGCTTCTGGCCAATATCCATCTTCTCTGCTAATGAACATGAATGGCTTCAATAACCATACATCTCCATCTCCTTTAATGATGAACATGAACATGCAGGCAAGGCAAGCCATGCAGCAACAACCCCAGATGATGTATCACAGGTCTCCTTTTGTTCCCCCCAACACTGGCTATTACTACAACCACAGTGGCTACAGCCCTGCACATTACTCCTACTCCTATGGCTTGCCTAGTTACCCTGGTGGTGATGATCACACTGCAGCTCACATGTTCAGTGATGACAACACCAGCAGCAGCTGTTCAATAATGTAA 1194 0.4154 MTKEEDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQRIEGVYQVQIDAEQQKVTVLGSVDSATLIKKLVRAGKYAELWSQKTNQNQKQKNNNAKDEKNKGQKQGLPKGIEAFKNQHQKFPAFSSEEDEYYFETDEEDEDEDEEMRMLREKAIQMKMLKHQPPNANNVRKGMGSISAGANNGKMNNACNANSGKKGGPNHNMAMKDNPNGLDQKTMAALKLNNAHLNGEGLNLNLGEAKRANDIGAMMNLAGFHGNGANVGSATVLGGNNSNGFGGFPVQSNNMIPGSSAAFPSGGLASGQYPSSLLMNMNGFNNHTSPSPLMMNMNMQARQAMQQQPQMMYHRSPFVPPNTGYYYNHSGYSPAHYSYSYGLPSYPGGDDHTAAHMFSDDNTSSSCSIM 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02559 397 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 37 1 397 - -
Cca02g02559 397 ProSiteProfiles Heavy-metal-associated domain profile. 20 76 IPR006121 GO:0046872
Cca02g02559 397 SUPERFAMILY HMA, heavy metal-associated domain 12 78 IPR036163 GO:0046872
Cca02g02559 397 CDD HMA 16 75 IPR006121 GO:0046872
Cca02g02559 397 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 1 397 - -
Cca02g02559 397 Coils Coil 82 102 - -
Cca02g02559 397 Pfam Heavy-metal-associated domain 17 70 IPR006121 GO:0046872
Cca02g02559 397 MobiDBLite consensus disorder prediction 81 103 - -
Cca02g02559 397 Gene3D - 12 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02559 Cca-Chr2 46727914 46730387 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02559 02 46727914 46730387 Cca02g02559 02 46727914 46730387 ECH