Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00961 ATGGGTCTCGTGACGAATCAGCGAGGCTCCAGAGCAGAGGCGGCCCAAGAGGGCCCACCCGTTGTGGGTTCGGGCGGGGCGGCGGGGCCCAAGAGGAGATGGACCAATCTCATGCCTCTCGTCGTGGCCTTTGTCGTCATTGCGGAGATCGCGTTTCTGGGTCGGTTGGATGTGGCCAAGAACGCAGCCATGGTAGACACTCTCGCTGACTTCTTCTACCGCTCCCGTGTCCCCTTTGAAGGTGACGATTTGGACTTCGTTGTGTCGGGTGCTGATCGGAATTCTCAATCGGGGACCTGCGAGGAGTGGTTGGAGAGGGAAGATGCTGTTGCGTATTCGAGGGACTTTGCCAAAGAACCGGTTTTTGTTTCTGGAGCTGATCAGGAGTGGAAGTCCTGTTCGGTGGGATGTAAATTTGGGTTTAGTGGGGATAAGAAACCTGATGCTGCATTTGGGTTACCTCAACCAAGTGAAACAGCTAGTGTTCTGCGATCAATGGAATCAGCACAATACTATGCTGAAAACAATATTGCCATGGCAAGACGAAGGGGATATAGCATTGTAATGACGACCAGTCTATCATCTGATGTTCCTGTTGGATATTTTTCTTGGGCTGAGTATGACATTATGGCACCAGTGAAGCCAAAAACTGAGAGTGCTCTTGCGGCTGCATTCATTTCCAATTGTGGTGCTCGGAATTTCCGGTTGCAAGCTCTTGAAGCCCTTGAAAAATTAAACATCAAGATTGACTCTTATGGTGGTTGTCATAGGAACCGTGATGGAAATGTGAACAAAGTGGAAGCCTTGAAGCACTACAAATTTAGCTTAGCATTTGAAAATTCTAACGAGGAAGATTATGTAACTGAAAAATTCTTCCAATCCCTTGTTGCTGGAACTGTCCCTGTGGTTGTTGGTGCTCCAAATATTCAGGAGTTTGCTCCTGCTATTGGTTCAGTTTTACATATTAAAGAGATAGAGGATGTCGAGGCCGTTGCGAGGTCCATGAGACACCTAGCAGAAAATCCTGAAGCATATAATCAATCATTGAGGTGGAAGTATGAGGGGCCATCTGATTCCTTCAAGGCTCTTGTCGATATGGCAGCTGTACATTCATCCTGCCGCCTTTGCATTCACTTGGCCACATTGAGTAGAGAGAAGGAAGAAAATAGTCCAGACTTTAAGAAACGCCCTTGCAAATGCACTAGAGGGTCAGAAACTGTATATCATATTTATGTGAGAGAAAGGGGAAGATTTGAATTGGAGTCCATTTACTTGAGGTCTAGCAATTTAACACTGGAGGCCTTGAAGTCTGCTGTTGTTTCGAAGTTCACATCCCTGAATCATGTACCTATATGGAAGTCAGAAAGACCTGAAGTTCTAAGAGGGGGCAATGATTTAAAACTTTACAAAATATACCCAGTTGGCTTGACACAGAGACAAGCTCTTTATACCTTCAGCTTCAAAGGGGATGAGGATTTAAGGAGTCACTTGGAAAGCAATCCTTGTGCGAAGTTTGAAGTCATTTTTGTGTAG 1533 0.4599 MGLVTNQRGSRAEAAQEGPPVVGSGGAAGPKRRWTNLMPLVVAFVVIAEIAFLGRLDVAKNAAMVDTLADFFYRSRVPFEGDDLDFVVSGADRNSQSGTCEEWLEREDAVAYSRDFAKEPVFVSGADQEWKSCSVGCKFGFSGDKKPDAAFGLPQPSETASVLRSMESAQYYAENNIAMARRRGYSIVMTTSLSSDVPVGYFSWAEYDIMAPVKPKTESALAAAFISNCGARNFRLQALEALEKLNIKIDSYGGCHRNRDGNVNKVEALKHYKFSLAFENSNEEDYVTEKFFQSLVAGTVPVVVGAPNIQEFAPAIGSVLHIKEIEDVEAVARSMRHLAENPEAYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATLSREKEENSPDFKKRPCKCTRGSETVYHIYVRERGRFELESIYLRSSNLTLEALKSAVVSKFTSLNHVPIWKSERPEVLRGGNDLKLYKIYPVGLTQRQALYTFSFKGDEDLRSHLESNPCAKFEVIFV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00961 510 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 111 383 - -
Cca01g00961 510 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 219 386 IPR001503 GO:0006486|GO:0008417|GO:0016020
Cca01g00961 510 MobiDBLite consensus disorder prediction 1 28 - -
Cca01g00961 510 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 33 487 IPR001503 GO:0006486|GO:0008417|GO:0016020
Cca01g00961 510 Gene3D - 164 359 IPR038577 -
Cca01g00961 510 PANTHER FUCOSYLTRANSFERASE-LIKE PROTEIN-RELATED 33 487 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00961 1 510 Xyloglucan Fucosyltransferase1 AT3G19280 66.860 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00961 K00753 - gmx:100776065 887.1