Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00455 ATGATAGCTCATCTTTTTAATGCGCCATTAGAAGAGTCTGAGGCTGCAGTTGGTGTTGGTACAGTCTGCTGGGAGAAATTTGCAAGGTACTTTGAGGTGGAGTTAAAGGAAGTTAAGCTGCGTGATGGGTACTATGTGATGGACCCTGAAAAGGCCGTGGAGTTGGTGGATGAGAACATTATTTGTGTTGCTGCTATCCTTGGTTCCACACTAAATGGAGAATTTGAAGATGTCAAACGTTTGAATGATCTCCTGATTGAAAAGAATAAGCAAACTGGATGGGACACTCCTATTCATGTGGACGCAGCTAGTGGTGGCTTCATTGCTCGATTTATTTACCCAGAGCTTGAGTAG 354 0.435 MIAHLFNAPLEESEAAVGVGTVCWEKFARYFEVELKEVKLRDGYYVMDPEKAVELVDENIICVAAILGSTLNGEFEDVKRLNDLLIEKNKQTGWDTPIHVDAASGGFIARFIYPELE 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00455 117 PANTHER GLUTAMATE DECARBOXYLASE 1 22 IPR010107 GO:0004351|GO:0006536|GO:0030170
Cca01g00455 117 Pfam Pyridoxal-dependent decarboxylase conserved domain 22 115 IPR002129 GO:0016830|GO:0019752|GO:0030170
Cca01g00455 117 Gene3D - 19 117 IPR015421 GO:0003824
Cca01g00455 117 PANTHER GLUTAMATE DECARBOXYLASE 22 117 - -
Cca01g00455 117 PANTHER GLUTAMATE DECARBOXYLASE 1 22 - -
Cca01g00455 117 PANTHER GLUTAMATE DECARBOXYLASE 22 117 IPR010107 GO:0004351|GO:0006536|GO:0030170
Cca01g00455 117 SUPERFAMILY PLP-dependent transferases 1 114 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00455 Cca-Chr1 5670181 5671074 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00455 1 117 Calmodulin-binding Proteins AT5G17330 65.190 3.45e-64 201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00455 01 5670181 5671074 Cca01g00455 01 5670181 5671074 ECH