Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01660 ATGGATCCACCACCTCTCTCGACCGCTACATCCACCTTTTCTTCGAATATCATCCAACAAAATTATCCTGACTCAATTGAGTCTTTATCATCTccaccaccaccaccaccagcacgatcacGCATTGGTGAACCAACGAATGATGAACACCTCCCTACTCTCCCCGGCGCCAAGCTTCGCCTCATGTGTAGCTACGGAGGCCATATCATGCCACGTCCACATGATAAGTCTCTTTGTTATGTTGGTGGTGACACACGAATCGTGATGGTTGATCGCAGTTCGTCCCTGAAAGACCTATGTTCGCGCCTTTCGCGAACAATTCTCAATGGAAGACCCTTTACTCTTAAATACCAACTTCCTAATGAAGAGCTTGACAACCTCATCACAGTCACAACAGATGAAGATCTCGATAACATGATCGAAGAATACGATCGTTTATCATCTACTACAACAAAACCATCTTCAAGACTAAGAGTTTTTCTATTCTTTACAAAACCAGAATCCACACTTTCAATGGGATCTTTAATTGATGATGCAAAATCAGAAACATGGTTTGTTGATGCACTTAACAACTCAGGAATGCTATCAAGAGGTGTATCAGATTCAGCTGCAGGGGATTCTTTTTTGAATCTTGATGATTCTGTTCTTGCTTGTGGCTCAAGCAACAACTTAGATGCTCAAAGTGTAGTAGCAGAGTCATTGAATCTTCTTGAACAGaacaacaacaacaataacaacaaGGTTAAGAATGTTTCTGATGTTGTTTTGCATTCAAACTCAACGCCCGGTTCACCGATGCTAGAGAATAGTTCTTCTTCGTCTTCTTTGTCGCCTTCGATGGCTAATTTGCCTCCGATTCGTGTTCATGTCGACGAAAATAGTGGTAGCAGGCTTCAACAAGATAACAAAGTTGGGATGATAGAAGATAAATTTTCTCATATGAACTTTGCTGCAAATGATGGATTTGTTGTTTCTTCTGCTAATGTAGCTATGCCTGCAATTTcttctactactactattactactaGTGATGTTAATGTGAATAGGGTTGTTTCTGATGATGAAAGATCCGATCATGGAGTTTCGATCGGATCTCGAAAACCGCCTTTACCATTGCAGCTTGTTCAACCAAGGACTAATGGTGGTTTGAGTGTTCCTTCACCAGATTCAGTTACAAGTGATAGTAGTATTGCATCTACAAATTCTTTCTCCAAGATTATTTATCATCAAGAACAAGTCCAAGTTCAAGTCCAACCTACACAATTAGACAACAAATCTCAAGATACTAATTACATGTTACCTCCACAATTAGATcaaaatcaacaactccatcaacaacaacaacaacaaTTTGTTCATTCCAACACTCACTTTATCCACCACCCTACAACCACAAGTCAAGTTCCAATTTCATCATATTACCAAGTTTACCCCTCACCATCACAACAACAAATTCACCATCCTATTGGTCAACAACAATTTCCACTTTATGTAATGCCTATTGGATCAACACAACCATATAACATGACATTACAACATAATATGAATGTAAATGACCCTAATGTTGTAGCATCTAGTATTCCAATAATACCTCAAATTAATGCTACTCCACCTATTTACCCTACACAATCAACTAACCCTAGTGAGGTAAACCCTAGTGTTTACAAAACAAATGTTGCATCAAATTCTACATTTGTTCAAATTCCTTCAAATCAATTTCAACAACAACAATATGTTGGTTTGCCTCAATTTCATCATCAACCACATCAAATTAATGTAGCTCCATCTAGTGGTACAAATTATGGTTATGAATATGGTGGTGGCAATGTGCAAGATCAAGTATACTATACTCAACAACAAACAAATGCTCCATTGATTCCTCAGTATCAATCCATGACTCCAGCTGCTGCTGCTGCAGCATTATCTGATGCTTCCAAACAATTTCCGGCGGAGAATGTTCAACAGCCGAATAGAACTTCACAGCCAGTTTAA 1992 0.3675 MDPPPLSTATSTFSSNIIQQNYPDSIESLSSPPPPPPARSRIGEPTNDEHLPTLPGAKLRLMCSYGGHIMPRPHDKSLCYVGGDTRIVMVDRSSSLKDLCSRLSRTILNGRPFTLKYQLPNEELDNLITVTTDEDLDNMIEEYDRLSSTTTKPSSRLRVFLFFTKPESTLSMGSLIDDAKSETWFVDALNNSGMLSRGVSDSAAGDSFLNLDDSVLACGSSNNLDAQSVVAESLNLLEQNNNNNNNKVKNVSDVVLHSNSTPGSPMLENSSSSSSLSPSMANLPPIRVHVDENSGSRLQQDNKVGMIEDKFSHMNFAANDGFVVSSANVAMPAISSTTTITTSDVNVNRVVSDDERSDHGVSIGSRKPPLPLQLVQPRTNGGLSVPSPDSVTSDSSIASTNSFSKIIYHQEQVQVQVQPTQLDNKSQDTNYMLPPQLDQNQQLHQQQQQQFVHSNTHFIHHPTTTSQVPISSYYQVYPSPSQQQIHHPIGQQQFPLYVMPIGSTQPYNMTLQHNMNVNDPNVVASSIPIIPQINATPPIYPTQSTNPSEVNPSVYKTNVASNSTFVQIPSNQFQQQQYVGLPQFHHQPHQINVAPSSGTNYGYEYGGGNVQDQVYYTQQQTNAPLIPQYQSMTPAAAAAALSDASKQFPAENVQQPNRTSQPV 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01660 663 MobiDBLite consensus disorder prediction 20 51 - -
Car08g01660 663 MobiDBLite consensus disorder prediction 257 283 - -
Car08g01660 663 Coils Coil 234 254 - -
Car08g01660 663 MobiDBLite consensus disorder prediction 353 396 - -
Car08g01660 663 SMART PB1_new 73 164 IPR000270 GO:0005515
Car08g01660 663 MobiDBLite consensus disorder prediction 638 663 - -
Car08g01660 663 MobiDBLite consensus disorder prediction 647 663 - -
Car08g01660 663 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 1 656 - -
Car08g01660 663 MobiDBLite consensus disorder prediction 377 396 - -
Car08g01660 663 ProSiteProfiles PB1 domain profile. 58 164 IPR000270 GO:0005515
Car08g01660 663 MobiDBLite consensus disorder prediction 257 281 - -
Car08g01660 663 CDD PB1_UP2 62 162 - -
Car08g01660 663 PANTHER OS05G0427100 PROTEIN-RELATED 1 656 - -
Car08g01660 663 SUPERFAMILY CAD & PB1 domains 74 173 - -
Car08g01660 663 Gene3D - 78 163 - -
Car08g01660 663 Pfam PB1 domain 74 162 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01660 Car-Chr8 26452773 26456207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01660 58 191 MAP Kinase Kinase Kinase AT5G57610 44.444 2.05e-26 113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01660 08 26452773 26456207 Car06g00200 06 2178390 2179675 ECH
Car06g01491 06 14529816 14531576 Car08g01660 08 26452773 26456207 ECH
Car08g01660 08 26452773 26456207 Car08g01660 08 26452773 26456207 ECH