Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01645 ATGTCTCTAAATTCTCCATTGATTGAAGAAAGAAAACAGAACAAACAACAAGTAATTGAAGAAGTGAAGAAACAGTTATGGTTATCAGGACCGTTAATTTCAGTTACACTGTTGAATTTTGGTATAAATCTAATATCAGTTATGTTTGTTGGACATCTTGGTGAGTTGTCTCTCTCTGGTGCTTCCATGGCTACTTCTTTTGCTTCTGTCACTGGTTTCAGTTTACTGGTGGGAATGGCAAGTGCATTAGACACATTATGTGGACAATCATATGGAGCAAAACAATACCAAATGTTAGGCATACACATGCAAAGAGCAATGTTCATTCTCATGATTGTTGCCATTCCACTTTCAATCATTTGGGCTAACACAAAATCCATTCTCATTTTCCTCGGCCAAGATCCCGAAATATCGACCGAAGCCGGAAACTACGCTAAACTAATGGTTCCATGTCTCTTTGCTTATGGACTTCTACAATGCCTCAACAGATTCTTACAGACACAAAATATTGTGTTTCCTATGATGTTTAGTTCCTGTGCGACGACATTGCTACATCTTCCTGTGTGTTGGTTTTTGGTTTATAAGTCTGGATTAGGGAGTAGAGGTGCTGCTGTTGCAAATTCTATATCATATTGGTTGAATGTTACCATACTTTCACTTTATGTCAAGTTTTCTCCTTCATGTAAAAAAACTTGGACTGGTTTTTCAAAGGAGGCTTTGGCATGGAACAACATTCCAATTTTCATGAGGCTTGCTATTCCTTCAGCTGTAATGGTTTGCTTGGAAATGTGGTCATTTGAATTAATGGTTCTCCTTTCTGGCCTTCTCCCAAATCCAAAGTTGGAAACATCAGTGCTTTCTATCTGTTTGAATACATCAGCAGCTGTTTGGATGATTCCCTTTGGACTTAGTGGAGCTATAAGCATTCGAGTTTCGAACGAACTCGGGGCTGGTCATCCATGGACCGCGCGGCTGGCCGTGTGCGTTGTGGTAGTGATTGCCATTATTGAGAGCATCATAGTTGGAGTAGTTCTAATACTAATACGCAATATATGGGGCTATGCTTATAGCAATGAAGAAGAAGTTGTCAAATATGTAGCAACTATGTTGCCAATTCTTGCAGCATCCAACTTCTTAGATGGATTACAATCTGTTCTTTCAGGCACTGCTAGAGGATGTGGTTGGCAGAAAATTGGTGCTTTTGTAAATTTGGGTTCATACTATTTAGTTGGAATTCCAGCAGCCATTGTATTAGCTTTTGTATTGAATATTGGTGGAAAGGGATTATGGCTTGGGATTATATGTGCACTTCTTGTTCAAGTAATTTCTCTAATGATCATTACAATAAAAACTGATTGGGAGAAAGAGGCAAAGAAGGCTACAGATAGAATTTTGGGGAAACCTAAAGCTCTCCCAAAGAAAGAGAGAGAGAGAGGGCATAATGGGAATATGCAAAGGGGAAATAAGAGAAGAAGCCATTTGGATGATAGAGTGCTTCTAGCTGGTGCTGCTTTGGCCAATTCATTTATGATGGCCATTGGTACAGCTGTATTGATAGGTTTTGCTAGTGCATTGGAAACTTTTTGTGGTCAATCATATGGAGCAAAGAAGTATCATATGGTGGGAATACACTTGCAAAGAGCTATATTAATAAACATGCTTTTTACTATTCCTCAATCCCTTGTTATGGCAAACTTAAGGCCTATTCTAATAGCTTTACATCAAGACCACAATATAGCAACACAAGCTGGAATATATGGAAGATACTTGATCCCAAACCTTATTGCAAATGGTCTTCTTAGATGTTTTGTTAAATTCCTACAAACTCAAAACATAGTATTTCCTATGTTGCTAGCTTCTGGAATTACTAGCTTGTTACATTTTCTCAATTGTTGGATTTGGGTTGTAAAATTAAGACATGGAATCAAAGGAGCTGCAATTGCAATGTGCATGTCAAATTGGTTATACACAATTTTATTAGCACTTTACATCAAATTCTCATCTACTTGCAAAAGCACTTGGACTGGTTTCTCAAGGGAGTCATTGCATAACATGCCTCAATTTCTCAAGATTGGTATTCCTTCAGCAATCATGCTTTGCTTAGAAATATGGATGTATGAAATAATGATGCTCCTCTCTGGTTTACTTCCTAATCCAAAATTGCAAACTTCAGTGATTTGTATATGCATGAATATATCATCAGTTGTGTGGATGCTTTCCTCTGGATTCACTGGAGCTGCAAGCATTCGTGTCTCAAATGAATTAGGAGCTGGTAATCCAAGGGCTGCATGTTTGGCAGTGTATGTTGTTTTGGTGCTTGTTACTGTTGATACCATCTTAGTTGGATCAGTTATGATATTGTTGCGTAATATATGGGGCTATGCTTATACCAATGAAATTGAAGTTGTCAAATTTGTAGCATCTATGTTTCCATTACTTGTAGTAGTCAACTTTGTGGATTCACTAGCAAGTGTTCTCTCAGGCATTGCTAGAGGATGTGGTTGGCAAAAAATTGGTGCTATTATCAATTTGGGTTCAGGCTATATAATTGGGATTCCAACAGCCATTGTGTTAGGTTTTGTATTGCATATCGGTGTGAAG 2601 0.3806 MSLNSPLIEERKQNKQQVIEEVKKQLWLSGPLISVTLLNFGINLISVMFVGHLGELSLSGASMATSFASVTGFSLLVGMASALDTLCGQSYGAKQYQMLGIHMQRAMFILMIVAIPLSIIWANTKSILIFLGQDPEISTEAGNYAKLMVPCLFAYGLLQCLNRFLQTQNIVFPMMFSSCATTLLHLPVCWFLVYKSGLGSRGAAVANSISYWLNVTILSLYVKFSPSCKKTWTGFSKEALAWNNIPIFMRLAIPSAVMVCLEMWSFELMVLLSGLLPNPKLETSVLSICLNTSAAVWMIPFGLSGAISIRVSNELGAGHPWTARLAVCVVVVIAIIESIIVGVVLILIRNIWGYAYSNEEEVVKYVATMLPILAASNFLDGLQSVLSGTARGCGWQKIGAFVNLGSYYLVGIPAAIVLAFVLNIGGKGLWLGIICALLVQVISLMIITIKTDWEKEAKKATDRILGKPKALPKKERERGHNGNMQRGNKRRSHLDDRVLLAGAALANSFMMAIGTAVLIGFASALETFCGQSYGAKKYHMVGIHLQRAILINMLFTIPQSLVMANLRPILIALHQDHNIATQAGIYGRYLIPNLIANGLLRCFVKFLQTQNIVFPMLLASGITSLLHFLNCWIWVVKLRHGIKGAAIAMCMSNWLYTILLALYIKFSSTCKSTWTGFSRESLHNMPQFLKIGIPSAIMLCLEIWMYEIMMLLSGLLPNPKLQTSVICICMNISSVVWMLSSGFTGAASIRVSNELGAGNPRAACLAVYVVLVLVTVDTILVGSVMILLRNIWGYAYTNEIEVVKFVASMFPLLVVVNFVDSLASVLSGIARGCGWQKIGAIINLGSGYIIGIPTAIVLGFVLHIGVK 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01645 867 TIGRFAM matE: MATE efflux family protein 497 866 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car08g01645 867 TIGRFAM matE: MATE efflux family protein 31 430 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car08g01645 867 PANTHER MULTIDRUG RESISTANCE PROTEIN 15 464 - -
Car08g01645 867 PANTHER MULTIDRUG RESISTANCE PROTEIN 493 867 - -
Car08g01645 867 PANTHER PROTEIN DETOXIFICATION 15 464 - -
Car08g01645 867 PANTHER PROTEIN DETOXIFICATION 493 867 - -
Car08g01645 867 CDD MATE_eukaryotic 21 459 IPR045069 GO:0042910|GO:1990961
Car08g01645 867 Pfam MatE 254 416 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car08g01645 867 Pfam MatE 31 190 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car08g01645 867 Pfam MatE 694 856 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car08g01645 867 Pfam MatE 493 633 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car08g01645 867 MobiDBLite consensus disorder prediction 468 491 - -
Car08g01645 867 CDD MATE_eukaryotic 500 867 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01645 Car-Chr8 26280101 26293408 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01506 04 15253778 15256714 Car08g01645 08 26280101 26293408 ECH
Car08g01645 08 26280101 26293408 Car08g01645 08 26280101 26293408 ECH