Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01639 ATGTTTGTTGGACATCTTGGTGAATTGCCGCTCTCTGCTGCCTCTGTTGCCACTTCTTTTGTCACTGCCACTGGTTTCAATGTTATGTCAGGAATGGCATGTGCATTGGATACCTTATGTGGACAGTCATATGGAGCAAAGCAGTATCACATGTTAGGCATACTTATGCAAAGAGCAATATTCATTTTGATGATTGTTTGCATTCCAATATCAATTATTTGGGCAAACACAAATTCTATTTTCATTTCATTTCACCAAGATCCTGAAATATCTGCAGAAGCTGGAAAGTATGCAATGTTAATGATTCCAAGCCTATTTGCTTATGGTCTTCAACAGTCCCTTAATAGATTTCTACAGACTCAAAATATTGTATTTCCATTGATGGTGATTGCTAGTATAATAACTTCACTACATGTTCTTTTTTGTTGGATTATGGTTAACAAGACTGGACTTGGAAGCAGTGGTGCTGCTGTTGCAAATTCTATGTCTTATTGGCTCAATGTTATTATGCTTATACTTTATATCAAGTTTTCTTCTTCTTGTAACAAAACATGGACTGGATTTTCCAAAGAGGCATTGCACAATATTCCTATGTTCCTTAGGCTTGCAATTCCTTCAGCTGTTATGGTTTGCTTGGAAATGTGGTCATTTGAGTCTGCAGTTATCATTTCAGGTCTTCTTCCTAATCCAAAGTTGCAAACATCAGTGCTATCCATCTGTTTGAGTTCAGCATCAATTGTTTGGATGATCCCCTTTGGACTCAGTGGAGCAGTAAGCATTCGCGTTGCGAATGAACTTGGAGCTGGTCAACCAATGGTTGCACGTATGGCCGTATGCATCGTTGTTGTGATCGGAATTATTGTGAGCATGGTAGTTGGAACGGTTATGACGGTTTTACGCAATATATGGGGCTATGCTTATACCAGTGAAATTGAAGTGGTTAAACAGATTGCAAAAATGATGCCAATTCTTGTTGTATCCAACTTTTTAGATGGACCACAATGTGTTCTTTCAGGTACTGCTAGAGGATGTGGTTGGCAGAAAATTGGTGCTTATGTCAATTTGGTGTCATACTATTTGGTTGGGATTCCAGCTGGCATTGTAATGACTTTTGTATTTCATATTGGTGTCAAGGGACTCTGGTTGGGAATGATATGTGCACTCACAGTTCAAGTGTTTTCTTTAATTATCATTATAATACGCACTAATTGGGAGAAAGAGGCACAAAAGGCTACAGATAGAGTCTATAATTCAGTAACACCAGAAGAATGA 1272 0.3836 MFVGHLGELPLSAASVATSFVTATGFNVMSGMACALDTLCGQSYGAKQYHMLGILMQRAIFILMIVCIPISIIWANTNSIFISFHQDPEISAEAGKYAMLMIPSLFAYGLQQSLNRFLQTQNIVFPLMVIASIITSLHVLFCWIMVNKTGLGSSGAAVANSMSYWLNVIMLILYIKFSSSCNKTWTGFSKEALHNIPMFLRLAIPSAVMVCLEMWSFESAVIISGLLPNPKLQTSVLSICLSSASIVWMIPFGLSGAVSIRVANELGAGQPMVARMAVCIVVVIGIIVSMVVGTVMTVLRNIWGYAYTSEIEVVKQIAKMMPILVVSNFLDGPQCVLSGTARGCGWQKIGAYVNLVSYYLVGIPAGIVMTFVFHIGVKGLWLGMICALTVQVFSLIIIIIRTNWEKEAQKATDRVYNSVTPEE 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01639 423 PANTHER PROTEIN DETOXIFICATION 1 414 - -
Car08g01639 423 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 414 - -
Car08g01639 423 Pfam MatE 205 366 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car08g01639 423 Pfam MatE 1 144 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car08g01639 423 CDD MATE_eukaryotic 1 410 IPR045069 GO:0042910|GO:1990961
Car08g01639 423 TIGRFAM matE: MATE efflux family protein 1 381 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01639 Car-Chr8 26138497 26141492 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01639 08 26138497 26141492 Car06g00186 06 2055925 2058872 PCT