Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01623 ATGGAGGAAACAGCAACAGTACCAAAGTCTCTGATGGAGAATTTGTTAGGTCTTTTGAGGATTCGTGTGAAGCGTGGTGTTAATCTTGCTGTTCGTGATGTTCGTAGCAGCGATCCTTATCTTGTCATCAAGATGTATAATCAGAAACTTAAGACTCGTGTGATTAAAAAGGATGTTAATCCTGAGTGGAATGAAGACCTTACTTTGTCTATTATAGATCCTAATCACCAAGTTTCATTGACTGTATATGATCATGACACATTTAGCAAAGATGACAAAATGGGAGATGCGGATTTCGACATCTCGGCCTATATAGAAGCCCTGAGGATGAACGTAACCGGACTTGCCAATGGCACCGTACTCAAAAGAATACAACCAAGCAACCAAAACTGTCTCGCCGACGAGAGCTGTATTTATTATACGAACGGCAAAATTATCCAAGATATGATCCTTAGATTACAAAATGTCGAATGCGGCGAAGTCGAAATCAGTTTGCACTGGATTGATCTTCCTGGTTCTAAGGGTTTATAA 531 0.4011 MEETATVPKSLMENLLGLLRIRVKRGVNLAVRDVRSSDPYLVIKMYNQKLKTRVIKKDVNPEWNEDLTLSIIDPNHQVSLTVYDHDTFSKDDKMGDADFDISAYIEALRMNVTGLANGTVLKRIQPSNQNCLADESCIYYTNGKIIQDMILRLQNVECGEVEISLHWIDLPGSKGL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01623 176 SMART C2_3c 18 113 IPR000008 -
Car08g01623 176 Pfam C2 domain 17 103 IPR000008 -
Car08g01623 176 ProSiteProfiles C2 domain profile. 3 114 IPR000008 -
Car08g01623 176 Gene3D C2 domain 13 174 IPR035892 -
Car08g01623 176 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 8 175 - -
Car08g01623 176 CDD C2_ArfGAP 16 159 - -
Car08g01623 176 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 168 IPR035892 -
Car08g01623 176 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 8 175 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01623 Car-Chr8 25831745 25834069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01623 49 176 C2H2 Transcription Factor Family AT1G70790 59.231 1.23e-50 158
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01623 08 25831745 25834069 Car06g00155 06 1836974 1838014 ECH
Car06g00057 06 714587 716795 Car08g01623 08 25831745 25834069 ECH
Car08g01623 08 25831745 25834069 Car08g01623 08 25831745 25834069 ECH
Car06g00155 06 1836974 1838014 Car08g01623 08 25831745 25834069 PCT