Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03127 ATGCAAGACCCAACAACATTCCAACCCATGAAACCCCATTTTCCAGAACAAGAACAACTAAAATGTCCACGTTGTGAATCAAACAACACAAAATTCTGCTACTACAACAACTACAATCTCTCACAGCCACGCCATTTTTGCAAAAACTGTAAAAGGTATTGGACAAAAGGTGGTGCTTTGAGGAACATTCCTGTTGGTGGTGGAACAAGAAAAGCTACAAAACGTTCTTCAACTTCAAAACGCTCAActtcttcatcttcttcttctCCATCACCATCAATTGTAACTTCTTCAGCACAAGCTTCGGTTTCAGAATCTGACCCGACCCAGATTCATGTTAACCCGGTTGAGATTGGTGGTGGGAGTTTTAGTTCGCTTCTTTCATCAACTGAGCGATTTGGGAACCTTTTTGAGGGTCTGAATTCAAATGGGTCGGGTTTGAAAATGGTGCAAATGGGAGAATTTGGTGAGAATTTGAATTGTGACCCGGTTGTGAATTCGGGTCATAACCCGAATAGTACGCTTGGTGAATCAGATACTTTTTTGGGTTTGCAAAATGGTGATTCAAGTTGTTGGAATGGTAACCATGGTTGGTCTGATCTTGCAATATATACACCTAGCTCAAGTTATCAGTAG 636 0.3994 MQDPTTFQPMKPHFPEQEQLKCPRCESNNTKFCYYNNYNLSQPRHFCKNCKRYWTKGGALRNIPVGGGTRKATKRSSTSKRSTSSSSSSPSPSIVTSSAQASVSESDPTQIHVNPVEIGGGSFSSLLSSTERFGNLFEGLNSNGSGLKMVQMGEFGENLNCDPVVNSGHNPNSTLGESDTFLGLQNGDSSCWNGNHGWSDLAIYTPSSSYQ 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03127 211 PANTHER DOF ZINC FINGER PROTEIN DOF3.1-LIKE 2 211 - -
Car07g03127 211 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 2 211 IPR045174 GO:0003700|GO:0006355
Car07g03127 211 MobiDBLite consensus disorder prediction 78 111 - -
Car07g03127 211 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
Car07g03127 211 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
Car07g03127 211 MobiDBLite consensus disorder prediction 61 115 - -
Car07g03127 211 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03127 Car-Chr7 58491336 58493959 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03127 5 137 C2C2-Dof Transcription Factor Family AT1G51700 56.738 2.90e-45 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car07g03127 zf-Dof 6.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03127 - - gmx:100798927 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03127 07 58491336 58493959 Car07g03127 07 58491336 58493959 ECH