Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02607 ATGGCTCAGTGGCAAGGTGATTCTGATGACGATATTGATTACATGTTTAAGGTTGTGTTAATTGGAGACTCTGGAGTTGGAAAATCTCAGCTTTTAAATCGGTTTGTTAGAAATGAATTTCACATGAAATCTAAAGCTACAATTGGTGTTGAATTTCTGACTAAGACGGTTCTCATGGATCACAAACATGTCAAGGCTCAGATTTGGGATACTGCTGGTCAAGAAAGGTACCAAGCAATTACAACTGCATATTACAGAGGTGCAACTGGTGCATTACTAACATATGACGTAACCAAGCGCCATTCCTTTAACCATGTTGAAAAATGGCTAGACGAACTACACATGCATGCCGATAAAAACATAGTTGTCATGCTCGTTGGCAACAAGTCTGACCTGAATTCTATTCGAGAAGTGCCGACCGAGGAAGCAAAAGACTTTGCCAAGCAGAAAGGTCTCTTCTTCATCGAAACATCTGCGCTTGACTCCAACAATGTAGAACCAGCTTTCCTTGGTCTTCTTTCACAAATATATATGGCAGTCAGTAAGAAGCACATCACTGCAGATGGACATGAATCAAATTGGGATAAAGTAAACCTTGAATTTGTGGGAACAAAAATTAAGGTCTCATCACAAGAACCAGAATTTCAAAAATCTAAAAGGAGATACAATTGTTGCAGCGTTTTATAG 687 0.3916 MAQWQGDSDDDIDYMFKVVLIGDSGVGKSQLLNRFVRNEFHMKSKATIGVEFLTKTVLMDHKHVKAQIWDTAGQERYQAITTAYYRGATGALLTYDVTKRHSFNHVEKWLDELHMHADKNIVVMLVGNKSDLNSIREVPTEEAKDFAKQKGLFFIETSALDSNNVEPAFLGLLSQIYMAVSKKHITADGHESNWDKVNLEFVGTKIKVSSQEPEFQKSKRRYNCCSVL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02607 228 Pfam Ras family 17 177 IPR001806 GO:0003924|GO:0005525
Car07g02607 228 SMART rab_sub_5 16 179 - -
Car07g02607 228 PRINTS Transforming protein P21 ras signature 16 37 - -
Car07g02607 228 PRINTS Transforming protein P21 ras signature 39 55 - -
Car07g02607 228 PRINTS Transforming protein P21 ras signature 57 79 - -
Car07g02607 228 PRINTS Transforming protein P21 ras signature 119 132 - -
Car07g02607 228 PRINTS Transforming protein P21 ras signature 154 176 - -
Car07g02607 228 SMART ran_sub_2 21 215 - -
Car07g02607 228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 182 IPR027417 -
Car07g02607 228 SMART rho_sub_3 18 179 IPR001806 GO:0003924|GO:0005525
Car07g02607 228 PANTHER RAB GTPASE-LIKE PROTEIN G3A 1 226 - -
Car07g02607 228 CDD Rab11_like 13 177 - -
Car07g02607 228 ProSiteProfiles small GTPase Rab1 family profile. 11 228 - -
Car07g02607 228 ProSiteProfiles small GTPase Ras family profile. 10 228 IPR001806 GO:0003924|GO:0005525
Car07g02607 228 TIGRFAM small_GTP: small GTP-binding protein domain 14 169 IPR005225 GO:0005525
Car07g02607 228 SMART ras_sub_4 16 179 - -
Car07g02607 228 Gene3D - 8 225 IPR027417 -
Car07g02607 228 ProSiteProfiles small GTPase Rho family profile. 9 187 - -
Car07g02607 228 PANTHER - 1 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02607 Car-Chr7 49982959 49984965 Transposed