Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02602 ATGAGTGTTGTGTATACACATGCTCTCAACAACTATGAAGATGTAGCAAGGAAGAATACAGAAATGGAATCAAAAATTGGTAATTCACAACAACATTGTCACCCAAACAATCCCGGCTTATCGCGGTACAGTTCGGCTCCTAGCTCATTGCTTACAAGCCTAGTAGACACAAGAATTGGCTTCCTCAATGAAGAAACTTTCAGAAATTATAATCATAATCAGCATTATGCTCCAACCACAAGTTCAGAAATGGAAACCATGATGACAAATTCTGAACCTTTGTATGAGCTTGAAGAGAAACAAGTGAAGCATGAAGAAAAAGACCCTTTTTCGCAGAGATTACAATACAATGGTTACTCTTATGAATCTTCAAATCAGATAATTTATCAACCTCAGATGAGTCAAGGATTGCAAAATGGTTCTTTGGCTTTAGAGAATTATGCACAAACTAAAGTTGGTTTTTCTAACAATTGCTCCAATCTCATTAGGCAGAAGAGTTCCCCTGCTGAATTTTTCTCCAATTATTCAGTTGATAATGGTTTTGCATCACTGGGAGAGGTAGGAAGTGTTAGAGGCTGTGATGTCTCAAATGGACAATCTATTACATCAACTAGTGGATTGAATGGTGCTTTGAATTTCTCATCTAGACCAATCTCTTGCTCTATCATGATGCCACAAATTGTTGAAAATGAACATGAATCTCTTCAAGCAAATTGTATCAAAAGTAGAAACATTGGAAATGATAATGGTAACACTAAATGTAACATGCCTAGCTTCACCAATGACTATTGGGATAATTCAACATTCAATGCCCAAAAATCAGCCACTAATAGTGGTGAAATCATTTTTTCATCTTCAAATGCTTTGGAAACTCAGGATGTAGACTTTGGATACCAAAAACTTGGTTTGACTCATCATTTGAGTCTACCTAGCTCTTCTACTAAGATGACTACTATGGAGAAGTTTTTTCACACTCAAGGATCTGTTCCATGTAAAATTCGTGCCAAAAGAGGTTTTGCTACTCACCCTAGAAGCATTGCTGAGAGGGAAAGAAGAATAAGAATTAGTGCCAGAATAAAAAAATTACATGACCTTTTCCCAATTTCAGATAAGCAAACTAGCACAGCTGATATGTTGGATTTAGCAGTTGAGTACATTAAAGACCTAAGGAAACAGCTTGAGTTACTAACAGACACTAAGGCAAAGTGCACTTGTAGCAGTAATTAG 1227 0.3651 MSVVYTHALNNYEDVARKNTEMESKIGNSQQHCHPNNPGLSRYSSAPSSLLTSLVDTRIGFLNEETFRNYNHNQHYAPTTSSEMETMMTNSEPLYELEEKQVKHEEKDPFSQRLQYNGYSYESSNQIIYQPQMSQGLQNGSLALENYAQTKVGFSNNCSNLIRQKSSPAEFFSNYSVDNGFASLGEVGSVRGCDVSNGQSITSTSGLNGALNFSSRPISCSIMMPQIVENEHESLQANCIKSRNIGNDNGNTKCNMPSFTNDYWDNSTFNAQKSATNSGEIIFSSSNALETQDVDFGYQKLGLTHHLSLPSSSTKMTTMEKFFHTQGSVPCKIRAKRGFATHPRSIAERERRIRISARIKKLHDLFPISDKQTSTADMLDLAVEYIKDLRKQLELLTDTKAKCTCSSN 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02602 408 Gene3D - 341 406 IPR036638 GO:0046983
Car07g02602 408 MobiDBLite consensus disorder prediction 23 46 - -
Car07g02602 408 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 342 401 IPR036638 GO:0046983
Car07g02602 408 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 30 407 - -
Car07g02602 408 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 30 407 - -
Car07g02602 408 Pfam Helix-loop-helix DNA-binding domain 345 389 IPR011598 GO:0046983
Car07g02602 408 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 339 389 IPR011598 GO:0046983
Car07g02602 408 SMART finulus 345 395 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02602 Car-Chr7 49765742 49769719 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car07g02602 HLH 1e-08 No_clan