Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02576 ATGGGGAAGAAAAACAAAACGGCGAAGGAAAATGGCGGCGACGGCGGAACTGTAAAACAGAGTTCTTTAACTCTTTTTGTCTCCAATTTGCCCTATTCCTTTTCCAACTCTCAGCTTGAAGAAACTTTCAGTGAAGTTGGACCTGTTAGGCGTTGCTTCATGGTCACACAGAAGGGGTCTGCTCAACATCGTGGTTTCGGTTATGTTCAATTTGCTGTTGAGGCTGATGCTAACCGTGCCATTGAGCTGAAGAACAACTCATCGGTTGGTGGCCGAAAAGTTACAGTGAAGCATGCAATGCCTCGTCCTCCTCGTGAAGACCGAAGGTCAAAACCAGATCAAGAGGGCAAGGCAGATGATCTCACAGAGTCAAAGAATGAAGATAAAGACAGCGAATTATCTGGAGCCGAGAAGCCTGTTTCAGATTCAAAAGAAGAAGAAGTGAAAGTTTTGAATATACAAAAAATTTCAAGGAAGCCTACGGAAATAAAAAAAGCAGCTCTTTGTAATGATGTAGCAGATGAGGGGGGTGGCTCAGAAAAGCAGAAGGTTGCTAGAACTGTTATATTTGGTGGTCTGATCAATTCTGATATGGCTGATGATGTACACCGCCAAGCCAGAGATATTGGCACTGTGTGTTCTGTAAAGTATCCCCTTTCAAGGAATGATCTTCAGCAACATGGTCTGCTGCAAGATGGCTGTACATTGGATGCTTCAGCCGTACTTTATACGAGTGTAAAATCCGCTCGTGCTTCTGTTGCAACATTGCATAAAAAAGAGATAGGTGGGGGGACTGTTTGGGCACGCCAACTTGGTGGAGAGGGCGCCAAGACTCAGAAATGGAAGCTTATTGTCAGAAACCTTCCTTTCAAGGCCAAAGAAAATGAAATAAGAGATGTGTTTTCATCTGTGGGGCCCGTATGGGATGCATTCATTCCACACAAGTCCGACACAGGTCTTTCAAAGGGTTTTGCATTTGTAAAATTCACCAGCAAGCAAGATGCTGAAAGTGCTATTCGGAAACTCAATGGATCAAAGTTTGGGACTCGTCTCATAGCTGTTGACTGGGCTGTTCCAAAAAAGATATTTAATAATGATACCAATGATGATCTTGCTTCAGAGAAAGGAGAACCAAAAATAACAGATGAAGATGGTAGTACTACTGAGGATGATGTCGAGCATGTTGACAAACAATCTGATCATGGAGATGATAGTGATACTGATGGTGTTGTGGTGGAAGATGTTCCTTCTGAAGATGATTTTGACAAGGAAGCAGACATTGCAAGAAAGGTTCTGAACAACTTGATTACATCCTCTGCCAAAGACACATCTGTAAATAATGATTCTACGTGTTCTGATGCGAACAAGGAGCCAAAATCCAAAGAAACTGTTAAGGATGCAAATAGTAAAGCATCTAAGGAGTCTGACAAGGTTTCAGGTGTTTCTAAGCCTGAAACTTCCAGCAGAACCAATTTATCAAATCCTAAGGAAACAGAAGAGGATTTGCAAAGAACGGTTTTTATAAGTAATCTTCCCTTTGAGTGTGATGCTGAAGAAGTGAAGCAACGGTTTTCTGGATTTGGAGAAGTAGAATATTTTGTTCCCGTTCTCCACCAAGTGACCAAGCGACCACGAGGAACTGGTTTTCTTAAGTTTAAAACTGCAGAAGCAGCTGATACTGCAGTCTCGACTGCCGGTACTGCTTCTGGGATGGGTATTTTAGTAAAAGGTAGACCACTTAAAGTTTTAAAGGCTCTGGACAGGAAATCAGCTCATGACAAAGAACTGGAGAATGCAAAAAGTGAGGTTCATGACCACCGCAATCTTTACTTGGCAAAGGAGGGGCTTATTCTTGACGGGACTCCAGCTGCTGAAGGGGTTTCAGCCAGTGATATGTTAAAACGCAAAGATTTGGAAAGGAAAAAGAAGACAAAGCTTCAATCTCCAAATTTTCATGTTTCAAGAACTAGACTTGTTATCTACAATTTACCGAAGTCAATGACTGAAAAAGAACTAAAGAAGCTTTGCATTAATGCAGTCATCTCTAGAGCTACCAAGCAAAAACCTATAATTCGACAGTTAAAGCTTTTGAAAGATGGAAGGAAAGGAAAGGTTACTCAAGAACAATATTCCCGTGGAGTCGCCTTTCTTGAATTTTCAGAACATCAGCATGCCCTTGTTGCTTTGAGAGTTCTTAACAATAATCCTGAAACTTTTGGTCCTGAACATCGGCCGATAGTGGAGTTTGCTCTGGATAATGTTCAAACATTGAAACTTCGGAATGCAAGGCTACAGTCTCAGCAGCAGGCTCCTTATGATGACAACAATGGCAACGAAAATGACAAACCTGACAATGCAGAAGTTCACACACATGTAAAGGATAGAAAGCGAAAATCTCAAGAACATGACAAACCGGCAAAGGATTCGACGCAAAATTCTTATAGTGAACAAGGTGGTAAGGTGTCAAACGGAAAATCTCCTCAAGGAGGCAAATCCAAAAGACAGAAACCAAATACTGGAGTGTTATCCTTGAAAGAAAGTCCAAAAGCTTTGGTCAGGAAGGTAAAGAATAACCAAGATGGCCAGAATCACAGTGCTAAATTACATGAAGGTAGAAATACCGTCATTGACAGTAATAATAGGAAAAAATCAGGGAAGAAAGATGATGTGGTAAATGGAAAGAGGAAGATGCAAAACCAGGAACAAGCAGGGGAAAAGGTTTCTAGGAAAAGAACTAAGAAGAATAAAGATTCAGTAGGAAAGGAAACAGTAGATAAGCTTGACATGCTTATAGAACAATATAGATCCAAGTTCTCAAACAACAAAGGTTCCCAAGGAAATGAAGGTGAGAGGAAATCTAAACAGCTTAGAAAATGGTTCCAATCATAG 2889 0.4109 MGKKNKTAKENGGDGGTVKQSSLTLFVSNLPYSFSNSQLEETFSEVGPVRRCFMVTQKGSAQHRGFGYVQFAVEADANRAIELKNNSSVGGRKVTVKHAMPRPPREDRRSKPDQEGKADDLTESKNEDKDSELSGAEKPVSDSKEEEVKVLNIQKISRKPTEIKKAALCNDVADEGGGSEKQKVARTVIFGGLINSDMADDVHRQARDIGTVCSVKYPLSRNDLQQHGLLQDGCTLDASAVLYTSVKSARASVATLHKKEIGGGTVWARQLGGEGAKTQKWKLIVRNLPFKAKENEIRDVFSSVGPVWDAFIPHKSDTGLSKGFAFVKFTSKQDAESAIRKLNGSKFGTRLIAVDWAVPKKIFNNDTNDDLASEKGEPKITDEDGSTTEDDVEHVDKQSDHGDDSDTDGVVVEDVPSEDDFDKEADIARKVLNNLITSSAKDTSVNNDSTCSDANKEPKSKETVKDANSKASKESDKVSGVSKPETSSRTNLSNPKETEEDLQRTVFISNLPFECDAEEVKQRFSGFGEVEYFVPVLHQVTKRPRGTGFLKFKTAEAADTAVSTAGTASGMGILVKGRPLKVLKALDRKSAHDKELENAKSEVHDHRNLYLAKEGLILDGTPAAEGVSASDMLKRKDLERKKKTKLQSPNFHVSRTRLVIYNLPKSMTEKELKKLCINAVISRATKQKPIIRQLKLLKDGRKGKVTQEQYSRGVAFLEFSEHQHALVALRVLNNNPETFGPEHRPIVEFALDNVQTLKLRNARLQSQQQAPYDDNNGNENDKPDNAEVHTHVKDRKRKSQEHDKPAKDSTQNSYSEQGGKVSNGKSPQGGKSKRQKPNTGVLSLKESPKALVRKVKNNQDGQNHSAKLHEGRNTVIDSNNRKKSGKKDDVVNGKRKMQNQEQAGEKVSRKRTKKNKDSVGKETVDKLDMLIEQYRSKFSNNKGSQGNEGERKSKQLRKWFQS 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02576 962 MobiDBLite consensus disorder prediction 810 842 - -
Car07g02576 962 MobiDBLite consensus disorder prediction 947 962 - -
Car07g02576 962 MobiDBLite consensus disorder prediction 454 480 - -
Car07g02576 962 MobiDBLite consensus disorder prediction 767 962 - -
Car07g02576 962 CDD RRM1_RBM28_like 24 102 - -
Car07g02576 962 Gene3D - 269 388 IPR012677 -
Car07g02576 962 MobiDBLite consensus disorder prediction 365 423 - -
Car07g02576 962 SMART rrm1_1 282 355 IPR000504 GO:0003723
Car07g02576 962 SMART rrm1_1 657 748 IPR000504 GO:0003723
Car07g02576 962 SMART rrm1_1 505 583 IPR000504 GO:0003723
Car07g02576 962 SMART rrm1_1 24 97 IPR000504 GO:0003723
Car07g02576 962 MobiDBLite consensus disorder prediction 441 501 - -
Car07g02576 962 MobiDBLite consensus disorder prediction 99 147 - -
Car07g02576 962 CDD RRM4_RBM28_like 656 753 - -
Car07g02576 962 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 656 764 IPR000504 GO:0003723
Car07g02576 962 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 504 587 IPR000504 GO:0003723
Car07g02576 962 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 23 101 IPR000504 GO:0003723
Car07g02576 962 SUPERFAMILY RNA-binding domain, RBD 504 734 IPR035979 GO:0003676
Car07g02576 962 MobiDBLite consensus disorder prediction 86 147 - -
Car07g02576 962 PANTHER RNA BINDING PROTEIN 21 483 - -
Car07g02576 962 PANTHER RNA BINDING PROTEIN 504 768 - -
Car07g02576 962 Gene3D - 436 601 IPR012677 -
Car07g02576 962 Gene3D - 2 114 IPR012677 -
Car07g02576 962 CDD RRM2_RBM28_like 282 358 - -
Car07g02576 962 PANTHER RNA-BINDING MOTIF PROTEIN, Y CHROMOSOME, FAMILY 1 MEMBER C-RELATED 21 483 - -
Car07g02576 962 PANTHER RNA-BINDING MOTIF PROTEIN, Y CHROMOSOME, FAMILY 1 MEMBER C-RELATED 504 768 - -
Car07g02576 962 MobiDBLite consensus disorder prediction 1 20 - -
Car07g02576 962 MobiDBLite consensus disorder prediction 367 408 - -
Car07g02576 962 MobiDBLite consensus disorder prediction 777 809 - -
Car07g02576 962 SUPERFAMILY RNA-binding domain, RBD 22 267 IPR035979 GO:0003676
Car07g02576 962 Coils Coil 589 609 - -
Car07g02576 962 Gene3D - 655 750 IPR012677 -
Car07g02576 962 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 506 563 IPR000504 GO:0003723
Car07g02576 962 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 283 352 IPR000504 GO:0003723
Car07g02576 962 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 25 94 IPR000504 GO:0003723
Car07g02576 962 Coils Coil 747 767 - -
Car07g02576 962 SUPERFAMILY RNA-binding domain, RBD 277 361 IPR035979 GO:0003676
Car07g02576 962 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 281 359 IPR000504 GO:0003723
Car07g02576 962 MobiDBLite consensus disorder prediction 863 932 - -
Car07g02576 962 CDD RRM3_RBM28_like 504 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02576 Car-Chr7 49182126 49190491 Dispersed/Transposed