Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02550 ATGACTTATTCAGTTGGTACCCCACCATTTAAAGTATATGGTATTGCTGATACAGGTAGTGACATTGTTTGGCTTCAATGTAAGCCTTGCCAACAATGTTACAACCAAACATCTCCTATGTTCGATCCTTCAAAATCATCAAGTTACCAAAAGATTCCTTGCGAGGCTAATACATGTCAATATGTGAGAGACACTTCTTGTTCTGAACAAGATTCTTGTCAATATACCATTGAGTATGGTGATCGATCTCGTTCACAGGGAGATCTTAGTGTTGAAACACTTACATTAGAATCCACAATTGGTCATTCTGTTTCATTTCCTAAAACTGTGATAGGATGTGGAACACAAAATACTGTATCATTTGAAGGTCCTAGCTCTGGGATAGTTGGCCTTGGAGGTGGACCTGTGTCTCTAACAACACAATTGGGGTCGGCAATTGGTGGAAAATTCTCTTACTGTTTGGTGCCATTGTTGGTTGAATCAAACACGACAAGCAAACTCAATTTTGGAGATGCGGCTATGGTTTCAGGTGACGGTGTTGTGTCAACTCCTATTGTGAAAAAAGACCCAGAAGTTTTTTACTATTTGACTTTGGAAGCATTTACCGTAGGAAACAAAAGAGTAAAATTTGGTGGGTCTTTAGAAGATGGTGGGGATGAAGGTAACATTATAATTGATTCAGGTACTACATTGACACTTTTACCAAGTGATATTTATAGTAATTTGGAATCGGCTGTAGCAGAATTGATTGACCTAGAGCGTGTGCAAGATCCAAATAATATGTTTAGCCTTTGCTACAGTGTCACATCTAGTGAATATGATTTTCCCATCATCACTGCAAATTTCAAAGGTGCAGATGTAAAGTTGCATTCTATTAGTACATTTGTTCCAATTGCTGATGGGATAGTTTGCTTTGCTTTTACCTCATCTGAAATTGGTGCCATCTTTGGAAACTTAGCTCAACAGAATTTGTTGGTTGGTTATGACCTTGTGAAAAATCATGTATCATTTAAGCATACTGATTGTACCAAGCTTTAG 1038 0.3786 MTYSVGTPPFKVYGIADTGSDIVWLQCKPCQQCYNQTSPMFDPSKSSSYQKIPCEANTCQYVRDTSCSEQDSCQYTIEYGDRSRSQGDLSVETLTLESTIGHSVSFPKTVIGCGTQNTVSFEGPSSGIVGLGGGPVSLTTQLGSAIGGKFSYCLVPLLVESNTTSKLNFGDAAMVSGDGVVSTPIVKKDPEVFYYLTLEAFTVGNKRVKFGGSLEDGGDEGNIIIDSGTTLTLLPSDIYSNLESAVAELIDLERVQDPNNMFSLCYSVTSSEYDFPIITANFKGADVKLHSISTFVPIADGIVCFAFTSSEIGAIFGNLAQQNLLVGYDLVKNHVSFKHTDCTKL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02550 345 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 1 343 - -
Car07g02550 345 Gene3D Acid Proteases 1 169 IPR021109 -
Car07g02550 345 PANTHER OS07G0603500 PROTEIN-RELATED 1 343 - -
Car07g02550 345 ProSiteProfiles Peptidase family A1 domain profile. 1 338 IPR033121 -
Car07g02550 345 CDD pepsin_A_like_plant 1 342 IPR034161 -
Car07g02550 345 Pfam Xylanase inhibitor N-terminal 1 171 IPR032861 -
Car07g02550 345 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 223 234 IPR001969 GO:0004190|GO:0006508
Car07g02550 345 Gene3D Acid Proteases 170 345 IPR021109 -
Car07g02550 345 Pfam Xylanase inhibitor C-terminal 194 338 IPR032799 -
Car07g02550 345 SUPERFAMILY Acid proteases 2 343 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02550 Car-Chr7 48492626 48493663 Dispersed/Tandem