Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02545 ATGGAGTCATTAGTTCTTAAACTCCATGAAATCTCAGCCGTTAAATTCGGTAATTTCAAGCTTAAATCCGGCATTTCATCACCAATTTACATAGACCTCCGCCTTGTTGTATCTTACCCTTCCGTCCTCCGGCAAATTTCTCAAACTATGATTTCATCAGTCTCAGATACTAAATTTGACCTTGTGCTTGATCTTTATATCGCTCTTCCTATTGCCACTTGTGTGTCTGTCACTCACAATATCCCTATGGTCATGCGCCGCAAAGAAATCAAAGACTATGGCACTTCAAAAGCTATTGAAGGTGATTTCAAGCATGGACAGAGTTGCTTGATTGTTGAGGATTTAGTTACTAGTGGCACATCCATTTTGGAAACTGCTGCGCCATTGCGTGCCATAGGGTTGAAGGTCAGCAATGCTGTTGTTTTGATTGATAGAGAGCAAGGTGGAAGGGAGAATTTGGAGAGTAATGGAATCAAGTTGAAAGCGATTCTTAAATTGACTGAAATGGTGAAAATTTTGAGGGAAAAAGGAAGGCTTGATGAGGAGATGGTAAGGGTTGTTATGAGATTTTTAGAGAAAAATCGGAAGGTTGATGCTACTTTGGAAAATAAAACTAAGTTCAAGACGTTGTCGTATTCGGAGAGGGCTAAGTTGTCGAAGAATTTAATGGGGAAGAGATTGTTTCAGATAATGGCAGAAAAGGAAAGTAATTTGTGTTTGGCTGCAGATGTTGGAACTGCAGCTGAATTGCTTGAAATTGCTGACAAGGTTGGGCGTGAGATTTGCTTGCTGAAAACTCATGTGGATATTCTTCCAGATTTTACTCCGGATTTTGGTTCTAAGCTTCGTGTGATTGCAGAAAAACACAACTTCTTAATATTCGAGGATCGTAAGTTTGCGGACATTGGTAACACAGTGAGCATGCAGTATGAAGGAGGGATCTTTCATATATTGGATTGGGCTGATATAGTAAATGCTCACATTATCTCTGGTCCTGGAATTGTGGATGGACTGAAGTTGAAGGGTTTGCCTCGCGGAAAGGGTTTGTTGCTGCTTGCTGAAATGAGTTCAGCTGGTAACTTTGCCAAGGGGGACTACACTGCTGCTGCTGTCAAAATTGCTGAGGATCATTCTGACTTTGTTTTTGGCTTTATCTCTGTCAACCCAGCATTGTGGCCTGTGGCACCGATAAATCCTTGTTTCATTCATGCAACTCCTGGAGTTCAAATGTCGATTGGTGGTGATGGTTTGGGGCAGCAATATAATACTCCATATTCTGTTATCCATGATAGGGGTAGTGACATTATTATAGTGGGACGCGGTATCATCAAGGCGGAGAATCAGGCTGCGGCAGCTCGTGAATACCGTCTTCAAGGATGGAGTGCATATTTGGATAAGTGCAATTAA 1407 0.4165 MESLVLKLHEISAVKFGNFKLKSGISSPIYIDLRLVVSYPSVLRQISQTMISSVSDTKFDLVLDLYIALPIATCVSVTHNIPMVMRRKEIKDYGTSKAIEGDFKHGQSCLIVEDLVTSGTSILETAAPLRAIGLKVSNAVVLIDREQGGRENLESNGIKLKAILKLTEMVKILREKGRLDEEMVRVVMRFLEKNRKVDATLENKTKFKTLSYSERAKLSKNLMGKRLFQIMAEKESNLCLAADVGTAAELLEIADKVGREICLLKTHVDILPDFTPDFGSKLRVIAEKHNFLIFEDRKFADIGNTVSMQYEGGIFHILDWADIVNAHIISGPGIVDGLKLKGLPRGKGLLLLAEMSSAGNFAKGDYTAAAVKIAEDHSDFVFGFISVNPALWPVAPINPCFIHATPGVQMSIGGDGLGQQYNTPYSVIHDRGSDIIIVGRGIIKAENQAAAAREYRLQGWSAYLDKCN 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02545 468 Pfam Orotidine 5'-phosphate decarboxylase / HUMPS family 236 455 IPR001754 GO:0004590|GO:0006207
Car07g02545 468 PANTHER PHOSPHORIBOSYLTRANSFERASE, OROTIDINE 5-PHOSPHATE DECARBOXYLASE 1 468 - -
Car07g02545 468 PANTHER OROTATE PHOSPHORIBOSYLTRANSFERASE 1 468 - -
Car07g02545 468 Hamap Orotate phosphoribosyltransferase [pyrE]. 1 221 IPR023031 GO:0004588|GO:0006221
Car07g02545 468 TIGRFAM pyrF: orotidine 5'-phosphate decarboxylase 238 456 IPR014732 GO:0004590|GO:0044205
Car07g02545 468 SUPERFAMILY PRTase-like 3 189 IPR029057 -
Car07g02545 468 Gene3D - 1 207 IPR029057 -
Car07g02545 468 CDD OMP_decarboxylase_like 238 455 - -
Car07g02545 468 ProSitePatterns Orotidine 5'-phosphate decarboxylase active site. 293 306 IPR018089 GO:0004590|GO:0006207
Car07g02545 468 CDD PRTases_typeI 68 165 IPR000836 -
Car07g02545 468 Gene3D Aldolase class I 208 468 IPR013785 -
Car07g02545 468 SUPERFAMILY Ribulose-phoshate binding barrel 209 465 IPR011060 -
Car07g02545 468 TIGRFAM pyrE: orotate phosphoribosyltransferase 8 168 IPR004467 GO:0004588
Car07g02545 468 SMART OMPdecase_2 237 455 IPR001754 GO:0004590|GO:0006207
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02545 Car-Chr7 48380552 48383099 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00303 05 15224911 15230706 Car07g02545 07 48380552 48383099 PCT