Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car07g02540 | ATGATGTACAATGACCCTcataaccctcagcatcaacaccagcaccagtatcagcagcaacagcaacagcaacagcaacaacaacagcaGCATTTTCACCATCCGCAACCAGGTCCAGAATTCCACCGTGGACCTCCGCCGCCGTTGCCTCAGCCGCCTCCTCCTATGATGCGGCAGCCTTCCGCTTCGTCCACGAACCTCGCCCCCGAGTTTCACCATCCCGGACCTGGTGGCCCCCCTCCTCATTACGACGTTCATAATGATAACCATGGTGCAAAACGAATGAGAAAGCTCACTCAAAGGAAGGCAGTTGATTATACGAGTACAGTTGTGCGCTATATGCAGATTCGTACGTGGCAGCATGATTCAAGAGACAGGACAGTACTGCAACCTACAGCGGCAGCAGCAATTGATATGTTGCCAGCAGCTGGCTATTCAGACAATCCATCCACAAGCTTTGCTGCTAAATTTGTTCATACATCTCTAAATAAAAATCGCTGTCCTATTAATCGCGTTCTTTGGACTCCTACAGGTCGGCGTCTTATTACTGGCTCACAGACCGGGGAATTTACTCTTTGGAATGGACAGTCTTTTAATTTTGAAATGATACTTCAGGCTCATGATCAAGCAATCAGATCCATGGTCTGGAGTCACAATGACAACTGGATGGTCTCTGGTGATGATGGGGGCGCAATAAAGTATTGGCAGAACAACATGAACAATGTTAAAGCCAACAAATCTGCTCATAAAGAATCAGTCCGTGACTTAAGTTTCTGTAGGACAGATCTGAAGTTCTGTTCGTGTTCTGATGATACCACAGTTAAAGTTTGGGATTTTGCACGCTGTCAGGAAGAGTGTTCATTAACCGGCCATGGTTGGGATGTGAAGAGTGTTGACTGGCATCCAACCAAATCTCTATTAGTATCAGGCGGGAAAGATAATCTTGTGAAACTTTGGGATGCTAAAACGGGGAAAGAGCTTTGCTCGTTTCATGGCCACAAAAACACTGTGCTTTGTGTGAAATGGAATCAAAATGGAAACTGGGTGTTAACAGCTTCAAAAGATCAAATAATAAAGCTTTATGACATAAGGGCAATGAAGGAGCTTGAATCATTCCGAGGACACCGGAAGGATGTTACTACTTTGGCTTGGCATCCATTCCATGAAGAGTACTTTGTCAGTGGGAGTTATGATGGTTCCATCTTCCATTGGCTTGTTGGGCATGATACTCCACAAATTGAAATTTGCAATGCTCATGATAATAATGTGTGGGATCTTGCATGGCATCCTATTGGATACCTTCTGTGCAGTGGTAGCAGTGATCATACAACAAAGTTTTGGTGCAGAAACAGGCCGGGAGACAGTGCCCGTGATAGATATAACACTGGCATGCAAGGATATGCTGAGCAAAATCCTGTTGCTGGTCGTGTGGGTGGTAATTTTGCAATACCTGAAGGACCAACAACTCCAGGACCATTTGCCCCTGGGCTGAATCGAAATGAGGGTACCATTCCAGGTGTTGGAGTTGCAATGCCCTTGTCTATTCCTTCTCTTGATGGTCCCCAAGGGGAGCAGAAGCAGCCCCATCCTGGTTCAATGGGTGCTCCTCCTCTTCCCCCAGGTCCACATCCTTCTCTTCTTACTGCcaaccaacaacaacaaccattccaacaaaatccacagcaaattccacaacatcagcaccaGGCACTACCACAGCAGATGGGTCCTTTGCCTATGCCTCCAAATATGCCACAGCTACAGCACCCTTCCCATTCTCCTATGGTCCCTCACCAACATTTGCCCCGCCCTCCCCCCCAAATGCCACTTGGAATGCCAGGATCTATGCCAGTGCCTACATCTCATCCAATGTCAATCCCAGGACCTATGGGGATGCAAGGTCCAATGAATCAGATGGGTCCTCCAATGCCACAAGGTCATTATGTGGGCATGAATCAAATGCATTCAGGACCCTTGCCTACAAGTGGAGGACCACCTCTGGGAGGTTTCCCAAACAATATGCAAGGGCCACCAAATACCAGTTATCCTCAAGGTGCTTCATTTAACAGACCACAAGGTGGACCAATGCCCATGATGCAAGGGTATAATCCCTACCAGTCTGGAAATCAACCTGGGATGCCTCCAAACGCACAACCAGGGGGATCACACTCTCAAATGCCTCAATAA | 2187 | 0.4454 | MMYNDPHNPQHQHQHQYQQQQQQQQQQQQQHFHHPQPGPEFHRGPPPPLPQPPPPMMRQPSASSTNLAPEFHHPGPGGPPPHYDVHNDNHGAKRMRKLTQRKAVDYTSTVVRYMQIRTWQHDSRDRTVLQPTAAAAIDMLPAAGYSDNPSTSFAAKFVHTSLNKNRCPINRVLWTPTGRRLITGSQTGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEECSLTGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKTGKELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTTLAWHPFHEEYFVSGSYDGSIFHWLVGHDTPQIEICNAHDNNVWDLAWHPIGYLLCSGSSDHTTKFWCRNRPGDSARDRYNTGMQGYAEQNPVAGRVGGNFAIPEGPTTPGPFAPGLNRNEGTIPGVGVAMPLSIPSLDGPQGEQKQPHPGSMGAPPLPPGPHPSLLTANQQQQPFQQNPQQIPQHQHQALPQQMGPLPMPPNMPQLQHPSHSPMVPHQHLPRPPPQMPLGMPGSMPVPTSHPMSIPGPMGMQGPMNQMGPPMPQGHYVGMNQMHSGPLPTSGGPPLGGFPNNMQGPPNTSYPQGASFNRPQGGPMPMMQGYNPYQSGNQPGMPPNAQPGGSHSQMPQ | 728 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car07g02540 | 728 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 330 | 371 | IPR001680 | GO:0005515 | |
| Car07g02540 | 728 | MobiDBLite | consensus disorder prediction | 673 | 688 | - | - | |
| Car07g02540 | 728 | SMART | WD40_4 | 197 | 236 | IPR001680 | GO:0005515 | |
| Car07g02540 | 728 | SMART | WD40_4 | 281 | 320 | IPR001680 | GO:0005515 | |
| Car07g02540 | 728 | SMART | WD40_4 | 150 | 194 | IPR001680 | GO:0005515 | |
| Car07g02540 | 728 | SMART | WD40_4 | 409 | 448 | IPR001680 | GO:0005515 | |
| Car07g02540 | 728 | SMART | WD40_4 | 323 | 362 | IPR001680 | GO:0005515 | |
| Car07g02540 | 728 | SMART | WD40_4 | 365 | 405 | IPR001680 | GO:0005515 | |
| Car07g02540 | 728 | SMART | WD40_4 | 239 | 278 | IPR001680 | GO:0005515 | |
| Car07g02540 | 728 | MobiDBLite | consensus disorder prediction | 39 | 59 | - | - | |
| Car07g02540 | 728 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 288 | 325 | - | - | |
| Car07g02540 | 728 | CDD | WD40 | 166 | 447 | - | - | |
| Car07g02540 | 728 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 246 | 278 | IPR001680 | GO:0005515 | |
| Car07g02540 | 728 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 330 | 364 | - | - | |
| Car07g02540 | 728 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 416 | 447 | IPR001680 | GO:0005515 | |
| Car07g02540 | 728 | SUPERFAMILY | WD40 repeat-like | 158 | 447 | IPR036322 | GO:0005515 | |
| Car07g02540 | 728 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 204 | 236 | IPR001680 | GO:0005515 | |
| Car07g02540 | 728 | PRINTS | G protein beta WD-40 repeat signature | 265 | 279 | IPR020472 | - | |
| Car07g02540 | 728 | PRINTS | G protein beta WD-40 repeat signature | 307 | 321 | IPR020472 | - | |
| Car07g02540 | 728 | PRINTS | G protein beta WD-40 repeat signature | 435 | 449 | IPR020472 | - | |
| Car07g02540 | 728 | MobiDBLite | consensus disorder prediction | 545 | 572 | - | - | |
| Car07g02540 | 728 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 162 | 194 | IPR001680 | GO:0005515 | |
| Car07g02540 | 728 | PANTHER | WD40 REPEAT PROTEIN | 78 | 718 | IPR045245 | GO:0031124 | |
| Car07g02540 | 728 | MobiDBLite | consensus disorder prediction | 1 | 89 | - | - | |
| Car07g02540 | 728 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 372 | 404 | IPR001680 | GO:0005515 | |
| Car07g02540 | 728 | Gene3D | - | 320 | 462 | IPR015943 | GO:0005515 | |
| Car07g02540 | 728 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 246 | 278 | - | - | |
| Car07g02540 | 728 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 372 | 404 | - | - | |
| Car07g02540 | 728 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 307 | 321 | IPR019775 | - | |
| Car07g02540 | 728 | Pfam | WD domain, G-beta repeat | 286 | 320 | IPR001680 | GO:0005515 | |
| Car07g02540 | 728 | Pfam | WD domain, G-beta repeat | 415 | 447 | IPR001680 | GO:0005515 | |
| Car07g02540 | 728 | Pfam | WD domain, G-beta repeat | 247 | 278 | IPR001680 | GO:0005515 | |
| Car07g02540 | 728 | Pfam | WD domain, G-beta repeat | 368 | 404 | IPR001680 | GO:0005515 | |
| Car07g02540 | 728 | Pfam | WD domain, G-beta repeat | 324 | 362 | IPR001680 | GO:0005515 | |
| Car07g02540 | 728 | Pfam | WD domain, G-beta repeat | 202 | 235 | IPR001680 | GO:0005515 | |
| Car07g02540 | 728 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 204 | 236 | - | - | |
| Car07g02540 | 728 | MobiDBLite | consensus disorder prediction | 661 | 728 | - | - | |
| Car07g02540 | 728 | Gene3D | - | 103 | 319 | IPR015943 | GO:0005515 | |
| Car07g02540 | 728 | MobiDBLite | consensus disorder prediction | 486 | 600 | - | - | |
| Car07g02540 | 728 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 288 | 329 | IPR001680 | GO:0005515 | |
| Car07g02540 | 728 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
| Car07g02540 | 728 | MobiDBLite | consensus disorder prediction | 702 | 728 | - | - | |
| Car07g02540 | 728 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 416 | 447 | - | - |