Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02533 ATGGAAGATAATCCTACTTCAAGTGTTTTAGATGCGAAGGTCATTGGCATCCGTTTTAGTATGGCTACACGCCATGAAATTAGTACTGCATCCATTAGCGATTCCACAATTAGTCATGCTAGTCAGCTGGCAAATCCATTCCTTGGGCTTCCCCTTGAATTTGGACGATGTGAATCTTGTGGCACTTCTGAAGCAGGAAAATGCGAAGGCCACTTTGGATATATTGAACTTCCAGTTCCAATATACCATCCTAGCCATGTTACTGAGTTGAAGAAAATACTGAGCCTGGTCTGCCTAAACTGCTTAAAACTGAAGAAAACAAAGTTTCCTTCTTCAAGCAGTGGATTGGCACAGAGTTTATTATCTCCCTGTTGTGAGGATGTCAATGCCGCACAAGTTTCTATTCGGGAGGTCAAAACAGCTGATGGGGCTTGTTACTTGGCACTGAAGGTTTCAAAGTCAAAGATGCATGACGGTTTTTGGGGTTTTTTAGAAAAATATGGCTATCGCTATGGGGGTGATCATACTCGAGCTTTGCTTCCTTGTGAGGTGATGGAAATTATCAAAAGATTCCCACAAGAAACAAATAGGAAACTTGCTATAAAAGGATATTTTCCTCAAGATGGATATGTTTTGAAATACCTTCCGGTACCACCAAATTGCTTGTCCGTGCCAGTAGTTTCAGATGGTGTCAGTGTCATGTCTTCGGATCCTGCCATGACAATTCTTAGAAAATTGCTTAGGAAGGTTGAAATCATCAGAAGTTCTAGATCAGGTGAACCAAACTTTGAGTCTCATCAAGTGGAAGCTAACGACTTGCAATCAGTGGTTGATCAGTATCTTCAAGTTAGGGGTACTTCTAAGGCAACACGAGATATAGAAACACGTTATGGGGTTAATAAAGAGCTGAATGATTCCTCAACAAAAGCATGGTTAGAGAAAATGAGGACTTTATTTATAAGAAAGGGTTCAGGTTTTTCTTCCCGTAATGTGATAACTGGAGATGGCTATAAGAAGATAAATGAAGTAGGAATTCCACTTGAGGTTGCTCAAAGGATAACATTTGAGGAGAGAGTAAGCATACATAACATCCGTTATTTACAAAAGTTGGTTGATGAAAATATGTGCTTGACATACAAGGAAGGTGTGTCAACTTACTCATTAAGGGAGGGCTCAAAGGGGCACACATATCTTAAACCTGGTCAAATAGTGCATCGGAGGATTATGGATGGGGATGTTGTCTTCATCAACAGACCACCTACTACTCACAAACACTCATTGCAAGCGCTTGTAGTGTACATCCATGACGACCACACTGTCAAAATAAATCCGCTAATATGTGGACCCTTAGGGGCTGATTTTGATGGTGACTGTGTCCATCTTTTTTATCCCCAGTCACTTGCTGCTAAGGCTGAGGTTTTGGAGCTTTTCTCTGTAGAGAAACAACTTCTCAGCTCTCATAGTGGTAATCTGAACCTTCAGTTATCCACAGATTCATTATTGTCACTCAAGATGCTAGTCAAGAGTTGTTTTTTGGATAGAGCAGCAGCAAATCAAATGGCCATGTTTCTTTCATTGCCTTTGCCAATGCCTGCTTTGTTTAAGGCTGGTTCTGGCGATTCTTATTGGACTTCTGTTCAAATGTTGCAGTGTGCTTTGCCTTCCTCGTTTGATTGTACTGGAGGACGATACTTGATTAGGCAAAGGGAAATCTTAGAATTTGATTTTACCAGAGATCTTCTGCCTTCAATTATAAATGAAGTAGCGGCCTCAATTTTTTTTAGCCAGGGTCCTAAGGAGGCACTGAATTTCTTTGATGTGCTCCAGCCCTTTCTGATGGAAAACATATTTGCTCATGGATATAGTGTTGGATTGCAAGACTTTTCAATATCCAGGGCAGTGAAAAGGGTTATCAATAGAAGCATTGGGAAAATTTCTCCTTTGTTGCATCAGCTGAGGGTCGTATACAAAGAGCTGGTGGCACAACAACTGGAGAAACACATGCAAGATATTGAACTCCCTGTCATAAATTTTGCTTTGAAGTCAACCAAACTTGGAGATTTGATTGATTCGAAGAGTAAGTCAGCTCTTGACAAGGTGGTTCAACAGATTGGCTTCTTAGGCCAACAACTCTTTGAGAGAGGAAAGTTTTATTCCAAGGGATTGGTTGAGGATGTAGGTTCTCATTTTCACGTGAAGTGTTTCTATGATGGGGATGGTTATCCCTCTGCTGAGTTTGGGTTGCTCAAAGGATGTTTCTTTCATGGTTTAGATCCATATGAAGAGTTGGTGCATTCAATTGCAACAAGAGAAATAATTGTCCGCTCTTCTAGAGGATTATCTGAACCAGGCACACTATTTAAGAACTTGATGGCCATTCTCCGGGATGTTGTGATTTGCTATGATGGAACCGTGAGAAATGTATGTAGTAATTCCATCATCCAGTTTGAGTATGGCATACAATCTGGAGACAAATCCCAGCCCTTATTCCCAGCTGGTGAGCCTGTTGGTGTCTTAGCTGCAACTTCCATGTCAAACCCTGCCTATAAAGCCGTCCTTGATGCTAGTCCTAGCAGCAATTCTTCCTGGGAGTTTATGAAGGAAATACTCCTTTGCAAGGTGAACTTTAGGAATGAACCAAATGATCGTCGAGTAATTCTATATTTGAATGATTGTGATTGTGGGAGGAGTTACTGTCGTGAAAATGCTGCATATTTGGTTAAAAATCAATTGAGAAAAGTAAGCCTCAAGGATGCAGCACTAGATTTCACTGTTGAATACCAGCAGCAGCGAAGACGCAATGATGGTTCTGAAGATGCAGGCCTTGTTGGTCATATTCATCTGAATGAGGCGATGTTAGAGAAGCTGAAGATCAATATGTCTGAAGTTTACCAAAAATGCCAAGAAAGACTTAATTCCTTTAGTCGGAAGAAGAAAGTTTTCCATTTTTTTAGGAAAACTGAACTGTTTTTCAGCGAGTCTTGCTCTTCTCTGAATTCTTCTGCCCCTTGTGTAACAATCCTTTGGCCGGATGGTGATGATTTAGACCAAACCACTAAAGTCCTTGCTGACATGATCTGCCCAGTTCTTTTAGATACAATAATCCAAGGAGATCCTCGTATCAGCTCGGCAAATATAATTTGGGTTAATCCAGGCACGAACACATGGGTTCGTAACCCTTCCAAATCTTCTAATGGTGAATTAGCACTGGATGTCATTCTTGAAAAGGAAGCTGTTAAACAAAGTGGTGATGCTTGGAGGATCATACTTGATTCCTGCCTTCCTGTTCTCCATTTGATTGATACTCGGCGTTCTACCCCTTATGCTATTAAGCAAATTCAAGAACTACTGGGGATATCATGTACTTTTGACCAAGCGATTCAGCGTCTTGCAGCATCAGTAAGAATGGTGGCAAAAGGTGTTCTCAGAGAGCATCTCATTCTCTTAGCAAGTAGTATGACTTGTGGTGGGAATTTGGTTGGTTTTAATACAGGTGGTTATAAAACACTGGCACGCCAATTGAATATTCAAGTACCATTCACCGATGCAACACTCTTTACTCCTCGAAAATGCTTTGAAAGAGCTGCTGAGAAACGCCATGCAGACTCTTTGTCAAGCATTGTTGCCTCCTGTTCCTGGGGTAAACATGTGGCAGTTGGTACAGGATCAAGATTTGATATTGTATGGGATCCCAAAGAGGTAAAATCAAATGAGATTGAAGGGATGGATGTTTACAATTTTCTTAACATGGTCAAAGGCCTTGCCAATGGGGACGAAGAAAACAACGCTTGTTTGGGTGAGGACATTGATGATTTGCTAGACGATGATAATATGGACTGGGGTATGTCCCCAGAGCATACCTCTGGATTTGATGCTGTCTTTGATGAGAGTTTTGAACTACTGAATGGTTCAACATCCAATGGTTGGGATTCAAATAAAGATCAGAACAAAACAACAACAAATGATTGGTCTGGTTGGGGACAAAATAAATCTGAAATACAAGTTGATGTGGCTGAAACGGACCAATGGGGCTCTGGGAGCACTCAAAAGTGGAAAGCTGATATTACCAAAGAAGACTCTTCAAAATCTGGCGCTTGGGAGACCGGCACAAATCAAAATAGTGATCAGCCGTCATGGGGAGGAAATAAAACCGGAGTACAAGATGATGGAGTGGTAAAGACCCAATGGGAGTCTGGGAGCTCTCAAAAGTTGAAATCTGATATTAACAAAGACTCTTCAAAGTCTGGCGCTTGGGAGGCCAGCACAAATCAAAATAATGATCAGCCGTCATGGGGAAGAAATAAATCTGGAGTACAAGATGATGGAGCAGTAAAGACCCAATGGGAGTCTGGGAGTTCTCAAAAGTGGAAAACTGATGTTATTCAAGAAAACTCCTCAAAGTCTGGCGCTTGGGAGGCCAACACAAATAAAAACAGTGATCAGCCTTCTTGGGGCAAAAATAAATCTGGAATACAAGATGATGGAGCGGTAAAGACCCAATGGGAGTCTGGGAGTTCTCAAAAGTGGAAAACTGATGTTATTCAAGAAGACTCCTCAAAATCTGGCGCTTGGGAGGCCAACACAAATAAAAACAGTGATCCGCCTTCTTGGGGCAAAAATAAATCTGGAATACAAGATGATGGAGCGGTAAAGACCCAATGGGAGTCTGGGAGTTCTCAAAAGTGGAAAACTGATGTTATACAAGAAGACTCCTCAAAGCCTGGTGCTTGGGAGGCCAACACAAATAAAAACAGTGATCAGCCTTCTTGGGGCAAAAATAAATCTGGAATACAAGACGGAGCAGAAAAGGCCCAATGGGAGTCTGGAAGCTCTCAAAAGTGGAAAGCTGGTGTTGTTCAAGAAGACTCTTCAAAGTCTGGTTCTTGGGGGGCCAATACAAATCAAAATAGTGATCAGCCTTCTTGGGGTAAAAATAAATCTGGAATACAAGACGGAGCAGAAAAGGCCCAATGGGAGTCTGGAAGCTCTCAAAAGTGGAAAGCTGGTGTTGTTCAAGAAGACTCTTCAAAGTCTGGTTCTTGGGGGGCCAATACAAATCAAAATAGTGATCAGCCTTCTTGGGGTAAAAATAAATCTGGAATACAAGACGGAGCAGAAAAGGCCCAATGGGAGTCTGGAAGCTCTCAAAATTGGGATGCCAAAGTGCCAGTTGCCAAtagttcttggggaaaacccaaatcacaagaaaaccaaccttgggattccaagaatgagtcaaatccaactgcaagttcacgtggatgggactcgcaagttgcttctgctaattctgatagtgacaaaaattttcagtGGGGGAAACCAGGAAGAGAATCATTCAAGAAAAACCGTTTTGAAGGTTCACAAGGATCACAAGGTTGGGGTTCAAATGCTGGTGACTGGAAAAACAAGAATCGCCCTGCCAGACCACCTGGACCGAGGTTGGATTTATACTCTTCTGAGGAGCAAGATATTCTGAAGGATATTGAACCTATTGTGCAGTCCATCAGAAGAATCATGCAACAACAAGGGTACAATGATGGTGATCCACTAGCTGCTGAAGACCAACAATATGTGCTTGAGAATGTCTTTGAACATCATCCAGATAAAGAAACAAAAATGGGTGTCGGGATTGACCATGTCATGGTTAGCAGACACAGCAATTTTCAGGAGAGCCGATGCTTTTATGTGGTTTTAAAAGATGGTAAGAAAGAAGACTTTTCTTACCGCAAGTGCCTTGAAAGCTTTGTAAGGAAGAAATATGCAGACACAGCCGAATCTTTCTGTGGAAAATATTTCAGAAAGCCCCGTCCAAAGAGGGACCAGATTGCAAATTCAGGAGGGGAACAAACTGCAAATCCAGGAGGGGAGCAAACTGCAACTCCAGGAGGGGAGCAGACCACAACTCCAAATGGAGGGGAGCAGACTGCTACCCCAACTCCAGGAGGGGAGCAGACTACTATCTCAATTCCAGGAGGGGAGCAGACCACTACTCCAATGCCTATGGAAACCAATGAGTAG 6021 0.4116 MEDNPTSSVLDAKVIGIRFSMATRHEISTASISDSTISHASQLANPFLGLPLEFGRCESCGTSEAGKCEGHFGYIELPVPIYHPSHVTELKKILSLVCLNCLKLKKTKFPSSSSGLAQSLLSPCCEDVNAAQVSIREVKTADGACYLALKVSKSKMHDGFWGFLEKYGYRYGGDHTRALLPCEVMEIIKRFPQETNRKLAIKGYFPQDGYVLKYLPVPPNCLSVPVVSDGVSVMSSDPAMTILRKLLRKVEIIRSSRSGEPNFESHQVEANDLQSVVDQYLQVRGTSKATRDIETRYGVNKELNDSSTKAWLEKMRTLFIRKGSGFSSRNVITGDGYKKINEVGIPLEVAQRITFEERVSIHNIRYLQKLVDENMCLTYKEGVSTYSLREGSKGHTYLKPGQIVHRRIMDGDVVFINRPPTTHKHSLQALVVYIHDDHTVKINPLICGPLGADFDGDCVHLFYPQSLAAKAEVLELFSVEKQLLSSHSGNLNLQLSTDSLLSLKMLVKSCFLDRAAANQMAMFLSLPLPMPALFKAGSGDSYWTSVQMLQCALPSSFDCTGGRYLIRQREILEFDFTRDLLPSIINEVAASIFFSQGPKEALNFFDVLQPFLMENIFAHGYSVGLQDFSISRAVKRVINRSIGKISPLLHQLRVVYKELVAQQLEKHMQDIELPVINFALKSTKLGDLIDSKSKSALDKVVQQIGFLGQQLFERGKFYSKGLVEDVGSHFHVKCFYDGDGYPSAEFGLLKGCFFHGLDPYEELVHSIATREIIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGIQSGDKSQPLFPAGEPVGVLAATSMSNPAYKAVLDASPSSNSSWEFMKEILLCKVNFRNEPNDRRVILYLNDCDCGRSYCRENAAYLVKNQLRKVSLKDAALDFTVEYQQQRRRNDGSEDAGLVGHIHLNEAMLEKLKINMSEVYQKCQERLNSFSRKKKVFHFFRKTELFFSESCSSLNSSAPCVTILWPDGDDLDQTTKVLADMICPVLLDTIIQGDPRISSANIIWVNPGTNTWVRNPSKSSNGELALDVILEKEAVKQSGDAWRIILDSCLPVLHLIDTRRSTPYAIKQIQELLGISCTFDQAIQRLAASVRMVAKGVLREHLILLASSMTCGGNLVGFNTGGYKTLARQLNIQVPFTDATLFTPRKCFERAAEKRHADSLSSIVASCSWGKHVAVGTGSRFDIVWDPKEVKSNEIEGMDVYNFLNMVKGLANGDEENNACLGEDIDDLLDDDNMDWGMSPEHTSGFDAVFDESFELLNGSTSNGWDSNKDQNKTTTNDWSGWGQNKSEIQVDVAETDQWGSGSTQKWKADITKEDSSKSGAWETGTNQNSDQPSWGGNKTGVQDDGVVKTQWESGSSQKLKSDINKDSSKSGAWEASTNQNNDQPSWGRNKSGVQDDGAVKTQWESGSSQKWKTDVIQENSSKSGAWEANTNKNSDQPSWGKNKSGIQDDGAVKTQWESGSSQKWKTDVIQEDSSKSGAWEANTNKNSDPPSWGKNKSGIQDDGAVKTQWESGSSQKWKTDVIQEDSSKPGAWEANTNKNSDQPSWGKNKSGIQDGAEKAQWESGSSQKWKAGVVQEDSSKSGSWGANTNQNSDQPSWGKNKSGIQDGAEKAQWESGSSQKWKAGVVQEDSSKSGSWGANTNQNSDQPSWGKNKSGIQDGAEKAQWESGSSQNWDAKVPVANSSWGKPKSQENQPWDSKNESNPTASSRGWDSQVASANSDSDKNFQWGKPGRESFKKNRFEGSQGSQGWGSNAGDWKNKNRPARPPGPRLDLYSSEEQDILKDIEPIVQSIRRIMQQQGYNDGDPLAAEDQQYVLENVFEHHPDKETKMGVGIDHVMVSRHSNFQESRCFYVVLKDGKKEDFSYRKCLESFVRKKYADTAESFCGKYFRKPRPKRDQIANSGGEQTANPGGEQTATPGGEQTTTPNGGEQTATPTPGGEQTTISIPGGEQTTTPMPMETNE 2006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02533 2006 Gene3D - 322 486 - -
Car07g02533 2006 Gene3D - 1826 1919 - -
Car07g02533 2006 MobiDBLite consensus disorder prediction 1656 1698 - -
Car07g02533 2006 MobiDBLite consensus disorder prediction 1944 2006 - -
Car07g02533 2006 MobiDBLite consensus disorder prediction 1938 2006 - -
Car07g02533 2006 MobiDBLite consensus disorder prediction 1362 1406 - -
Car07g02533 2006 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 10 1232 - -
Car07g02533 2006 Gene3D - 796 835 - -
Car07g02533 2006 Pfam Protein of unknown function (DUF3223) 1844 1913 - -
Car07g02533 2006 Gene3D RNA polymerase II, clamp domain 4 121 IPR044893 -
Car07g02533 2006 MobiDBLite consensus disorder prediction 1413 1539 - -
Car07g02533 2006 MobiDBLite consensus disorder prediction 1304 1351 - -
Car07g02533 2006 MobiDBLite consensus disorder prediction 1546 1565 - -
Car07g02533 2006 Pfam RNA polymerase Rpb1, domain 5 756 1169 IPR007081 GO:0003677|GO:0003899|GO:0006351
Car07g02533 2006 Gene3D RNA polymerase ii 354 406 - -
Car07g02533 2006 PANTHER DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 196 1380 - -
Car07g02533 2006 MobiDBLite consensus disorder prediction 1708 1770 - -
Car07g02533 2006 Gene3D RNA polymerase Rpb1, domain 3 487 622 IPR042102 -
Car07g02533 2006 PANTHER DNA-DIRECTED RNA POLYMERASE 196 1380 IPR045867 GO:0003899|GO:0006351
Car07g02533 2006 SMART rpolaneu7 208 507 IPR006592 GO:0003677|GO:0003899|GO:0006351
Car07g02533 2006 MobiDBLite consensus disorder prediction 1574 1594 - -
Car07g02533 2006 MobiDBLite consensus disorder prediction 1304 1817 - -
Car07g02533 2006 Pfam RNA polymerase Rpb1, domain 2 325 479 IPR000722 GO:0003677|GO:0003899|GO:0006351
Car07g02533 2006 MobiDBLite consensus disorder prediction 1604 1646 - -
Car07g02533 2006 Pfam RNA polymerase Rpb1, domain 3 482 627 IPR007066 GO:0003677|GO:0003899|GO:0006351
Car07g02533 2006 MobiDBLite consensus disorder prediction 1785 1799 - -
Car07g02533 2006 Pfam RNA polymerase Rpb1, domain 1 37 282 IPR007080 GO:0003677|GO:0003899|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02533 Car-Chr7 48037769 48067201 Dispersed