Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02517 ATGGGAAGTAGAATTAGGGTTGGTGTTGAAGATGAGAAGGGAGCCCAAAGAGGGATGCCGAGCTTCAATTCCGAGTTACCAATTTCCAATTCATGCTATACAGAAGGGAACGCAATTGATACTTTTCATGTTTCTGACTTTGGAGCATTTGGTCAATCATATCGCTTAGAGGATGCTGTTGATCTGAGTGGAAATCCAGACTCGGTTTTTAACTCGCTAAAAGTAAGTGGCCAAACAATTTCTCCTGGCCCTGTTCGTATTAGTGCTCTCGATAAGTTGCCAACGTCTCTTGATAATAGCCCATTGACGAACCAAACACAGCTATATAGGTTGCGATTAACAAAGCTTCAATCATCAAATCTCGGCAGTGGTACCATATTAAGTGGTCATACAGAAAACCAGGAAGAGTCTGTCATGGCCGATGCCAGTCCAAGGACCGATATTTCAACAGATGTTGACACCGATGACAAGAATCAGCGGTTCGATCAAAATCAATCCCTTGTTGCAGTGGGTTCCGACTCCAGTGACCGATCAAAGGATAAATCAGATCAGAAGACTCTCCGCAGGCTCGCTCAGAATCGTGAGGCGGCAAGAAAAAGTCGGTTGAGAAAAAAAGCGTATGTCCAACAGTTGGAAAGTAGTCGTTTGAAGCTGACTCAACTAGAGCAAGAGCTTCAGCGCGCCAGGCAACAGGGAGTCTTCATATCAAGCTCTGGCGAACAAACACATTCATTGAGTGGAAATGGGGCCATGCAATTTGATGCAGAATACGCGAGGTGGCTGGAAGAGCAGAATCGACAAATTAACGAGCTGAGAGCAGCTGTAAATTCTCATGCAAGTGATACTGAACTTCGCATGATTGTTGATGGTATATTGGCGCATTATGATGAGATTTTTAGGCTGAAAGGTGTTGCGGCTAAGGCTGATGTTTTTCATTTGTTATCTGGCATGTGGAAAACACCTGCTGAGAGGTGTTTTTTGTGGCTTGGTGGTTTTCGGTCGTCTGAACTCCTCAAGCTTCTGGTAAGTCAATTGGAACCTCTCACAGAGCAGCAATTGATGGGTATTACCAACTTGCAACAATCCTCCCAACAAGCAGAAGATGCATTGTCTCAAGGCATGGAAGCATTACAACAGTCCCTCGCGGAGACGTTGTCGACTGGTGCACCTTCCTCATCTGGCTCTTCAGGGAATGTGGCAAATTACATGGGTCAAATGGCTATGGCCATGGGTAAGCTTGGGACACTTGAGGGCTTCATTCGACAGGCTGACAATCTGCGCCAGCAGACTCTACAACAAATGCACCGAATATTGACAACACGTCAATCGGCTCGTGCACTCCTTGCTATACATGATTACTTTTCGCGGCTGCGTGCTCTCAGCTCTCTCTGGCTGGCCCGTCCAAGAGATTAA 1413 0.4607 MGSRIRVGVEDEKGAQRGMPSFNSELPISNSCYTEGNAIDTFHVSDFGAFGQSYRLEDAVDLSGNPDSVFNSLKVSGQTISPGPVRISALDKLPTSLDNSPLTNQTQLYRLRLTKLQSSNLGSGTILSGHTENQEESVMADASPRTDISTDVDTDDKNQRFDQNQSLVAVGSDSSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGVFISSSGEQTHSLSGNGAMQFDAEYARWLEEQNRQINELRAAVNSHASDTELRMIVDGILAHYDEIFRLKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVSQLEPLTEQQLMGITNLQQSSQQAEDALSQGMEALQQSLAETLSTGAPSSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02517 470 Pfam Seed dormancy control 267 343 IPR025422 GO:0006351|GO:0043565
Car07g02517 470 Pfam Basic region leucine zipper 181 227 IPR004827 GO:0003700|GO:0006355
Car07g02517 470 Gene3D - 184 233 - -
Car07g02517 470 MobiDBLite consensus disorder prediction 123 144 - -
Car07g02517 470 CDD bZIP_HBP1b-like 185 237 - -
Car07g02517 470 SMART brlzneu 181 244 IPR004827 GO:0003700|GO:0006355
Car07g02517 470 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 188 203 IPR004827 GO:0003700|GO:0006355
Car07g02517 470 MobiDBLite consensus disorder prediction 1 21 - -
Car07g02517 470 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 62 470 - -
Car07g02517 470 Coils Coil 261 281 - -
Car07g02517 470 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 183 227 IPR004827 GO:0003700|GO:0006355
Car07g02517 470 ProSiteProfiles DOG1 domain profile. 250 467 IPR025422 GO:0006351|GO:0043565
Car07g02517 470 MobiDBLite consensus disorder prediction 123 187 - -
Car07g02517 470 PANTHER TRANSCRIPTION FACTOR TGA9 62 470 - -
Car07g02517 470 SUPERFAMILY Leucine zipper domain 185 228 IPR046347 GO:0003700|GO:0006355
Car07g02517 470 Coils Coil 204 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02517 Car-Chr7 47599479 47606474 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car07g02517 DOG1 5.2e-33 No_clan