Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02515 ATGGGTTCTTCAGTAGCAGGCAATGGAGGCGGTGGTGTGGAGTGGCACGTGCGTCCTCCAAACCCTAAAAACCCAATCGTTTTCTTCGATGTCACCATCGGTAACATACCTGCTGGTAGAATCAAAATGGAACTCTTCGCTGATATTGCCCCCAAAACCGCTGAGAATTTCAGGCAGTTCTGCACAGGAGAGTATAGGAAAGCAGGACTGCCTATTGGTTACAAGGGTTGCCAATTTCATAGAGTGATTAAGGATTTTATGATTCAGGCTGGTGATTATGTAAAGGGTGATGGTAGTGGATGTGCTTCGATATATGGACTCAAGTTTGATGATGAAAATTTCACTGCCAAACACACTGGACCTGGTCTTCTATCAATGGCAAATAGTGGACCAAATACCAATGGTTGTCAGTTCTTTATAACTTGTGCAAAATGCGATTGGCTGGACAACAAGCATGTTGTTTTTGGGAGAGTGCTTGGAGATGGTCTTTTGGTTGTGAGGAAGATTGAGAATGTTGCAACTGGACCCAATAACCGGCCAAAACTAGCTTGTGTCATTGCTGAATGTGGTGAAATGTAA 579 0.4387 MGSSVAGNGGGGVEWHVRPPNPKNPIVFFDVTIGNIPAGRIKMELFADIAPKTAENFRQFCTGEYRKAGLPIGYKGCQFHRVIKDFMIQAGDYVKGDGSGCASIYGLKFDDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02515 192 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 28 191 IPR002130 GO:0000413|GO:0003755
Car07g02515 192 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 29 190 IPR002130 GO:0000413|GO:0003755
Car07g02515 192 Gene3D - 14 192 IPR029000 -
Car07g02515 192 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 74 91 IPR020892 GO:0003755|GO:0006457
Car07g02515 192 SUPERFAMILY Cyclophilin-like 15 192 IPR029000 -
Car07g02515 192 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE H 21 192 - -
Car07g02515 192 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 21 192 - -
Car07g02515 192 PIRSF Peptidylpro_ismrse 15 192 IPR024936 GO:0003755
Car07g02515 192 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 60 IPR002130 GO:0000413|GO:0003755
Car07g02515 192 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 79 91 IPR002130 GO:0000413|GO:0003755
Car07g02515 192 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 IPR002130 GO:0000413|GO:0003755
Car07g02515 192 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 137 149 IPR002130 GO:0000413|GO:0003755
Car07g02515 192 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 150 165 IPR002130 GO:0000413|GO:0003755
Car07g02515 192 CDD cyclophilin_ABH_like 25 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02515 Car-Chr7 47586127 47591155 Transposed