Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02512 ATGAGTCCTCCAGCTGAAATTGACATGGAAGATATCAAACCCTCTGTTACACTGGTTGATAATGGTGAACAAGCTGAGTCTCGGTTTTCTGAGTTCTGCAAGAATGAGCTAGCATTGGAAGAGAAAAGCTGTAAAGAAGCAATGGATCTGTTTGGAGAAACCAAACATCTTCTAATTGCAAATGTTTCGTCATTGGGGAATGGAACGTCAGAAGACGCAGAGCGGCTCTGGTTTGCTTTTATTTTATACTCTATCAAGAGATTGATTCAGAAAAATGAGGAAAATGTGAATGAAGAGACCAAGAATACTGGGCTTACCTTGTGTCGAATATTGAGAGCAGCTAAGCTTAACATTGCAGATTTTTTTAAAGAACTTCCTCAGTTTATTGTTAAAGCTGGTCCAATTTTAAGCAATCTATATGGCACAGATTGGGAAAACAAGCTTGAGGCAAAGGAGATGCATGCCAACACTATTCACTTGAAGATTCTTAGCAAGTATTATAAACGTGTATTTGAAGAGTTTTTTGTGTCAACTGATGCAAATGTTGGAAATAATTCATCTGTTACTGTTCATGCGTCTGAATACCATCGCTTTGGATGGTTACTTTTCTTGGCACTTCGTGTTCACGCTTTCAGCCGTTTCAAAGACTTGGTGACTTGCACCAATGGTTTAATTTCTATCTTGGCTATCCTAATTATTCATGTTCCGACTCGTTTTCGGAATTTCAACATTCACGACTCTTCGCGCTTCGTTAAGAGAAGTAGCAAAGGTGTGGACCTTCTTGCTTCACTTTGCAACACATATAACACTTCAGAAGACGAGTTGAGGAAAACCATGGAGAAAGCCAATAATTTAATAGCTGATATACTGAAGAAGAAACCCTGTTTGGCATCTGAGTGCGAAACTGAAAACCTAGAGAATTTTGATAAAGATGGTTTAACTTATTTTAAAGATCTGATGGAGGAATCATCTCTGCCATCTAATTTGAATATCTTAGAGAATGATTATGATCACATGACTCGCAACAAGGGTGAACTTGATGAAAGATTATTCATTAACGAAGATGACAGCCTGCTAGTTTCAGGAAGTTTGTCTGGAGGTTCTGTTTCTGCAGGAGGTGTAAAGAGGAAGTTTGATTTGATGACATCACCTGTTAAGACCTTTGCAAGTCCACTTTCACCCCGTCGCTCTCCTGCATCCCATGCTCATAGCATTCCTGGTAGCGCAAATTCAAAGATGGGTGCCACCCCTGTAAGCACAGCAATGACTACTGCAAAGTGGCTCCGTACCGTCATTTCTCCACTTCCATCAAAGCCCTCGCAAGACCTAGAGCGATTCTTGACATCATGTGACAAGGATGTCACAAGCGATGTAGTACGCAGAGCACAGATTATGTTGCAGGCTATATTTCCTAGTAGTCCCCTCGGGGAGAGATGCGTATCTGGAAGCCTGCACAGTGCTAACCTCATGGACAATATATGGGCAGAACAACGAAGATTAGAAGCGCTGAAGTTATACTATAGGGTATTGGAAGCAATGTGCAGAGCAGAAGCCCAGATGCTTCATGCAACTAATTTAACTTCACTGTTAACGAATGAGAGGTTCCATAGGTGTATGCTCGCTTGTTCTGCAGAATTAGTCCTGGCAACTCACAAGACTGTAACAATGTTGTTCCCTGCTGTACTGGAGAGGACGGGAATTACAGCTTTCGATCTTAGCAAGGTGATTGAAAGTTTCATTAGACATGAAGAATCTCTTCCGAGAGAATTGAGGCGACATCTCAATTCGTTGGAGGAGCGACTTTTGGAGAGCATGGTATGGGAAAAGGGCTCTTCAATGTATAATTCATTGGCAGTTGCTAGACCTGCCCTTTCTTCAGAAATCAGTCGACTTGGTCTGTTAGCTGAACCAATGCCATCACTAGATGAAATCGCAATGCATATTAACTTCTCGTGTGGAGGACTGCCACCTGTGCCTTTGTTGCCTAAGCCTGAGGCTCTGCCAACTCAGAATGGTGACACCAGATCACCAAAGCGGCTCTGTACAGAGCAACGCAATGTGCTAGTGGAACGGAATTCTTTTACTTCACCAGTGAAAGATCGGCTTCTTCCCTTCAGCAACCTTAAGTCAAAATTACCCCCGCCACCTTTGCAGTCGGCATTTGCCAGTCCAACAAAGCCAAATCCAGGAGGTGGAGGGGAAACATGTGCAGAAACTGGGATCAGCATATTTTTTAGCAAGATCGTTAAGTTGGGAGCAGTCAGAATAAGTGGAATGGTTGAAAGGCTACAATTGTCTCAGCAGATAAGGGAGAATGTATACTGTCTTTTCCAGCGAATCCTAAATCAATGGACATCTCTCTTCTTCAACCGCCATATTGACCAAATCATTTTGTGTTGCTTCTATGGAGTTGCAAAGATTTCACAACTGAACCTAACTTTTAGGGAGATTATATACAACTACAGAAAGCAACCACAATGCAAACCGCAAGTTTTCCGTAGTGTATTTGTCGACTGGTCATCGGCACGCCGTAATGGGGCATCATGTAGACAAAGAGCAGGACAGGATCAAATTGATATCATTTCATTTTACAATGAAGTTTTCATTCCCTCTGTAAAGCCACTGCTGGTTGAACTTGGCCCTGGTGGATCAACTATGAGAAGTGATCGAGTAGCTGAAGCTACCAATAAAAACGACGGTCATTTAGCAAATGGTCCCGGATCGCCTAGAATATCACCTTTTCCAAGCCTTCCTGATATGTCACCTAAAAAAGTATCTGCCACACACAATGTGTACGTCTCTCCGTTACGATCATCCAAGATGGACGCCCTAATTTCACATAGCTCCAAAAGCTATTATGCATGTGTTGGAGAGAGCACTCATGCCTATCAGAGCCCTTCAAAAGATCTGACCGCCATAAACAATCGTTTAAATGGCAACAGGAAAGTAAGAGGGCCTCTCAATTTTGACGACGTCGATGTTGGCTTGGTTAGCGACTCTATGGTAGCAAACAGCCTGTATCTGCAGAATGGAAGTAGCGCGTCGTCATCGGGTGCACCATTGAAGTCTGAGCAACCTGACTCTTAA 3087 0.427 MSPPAEIDMEDIKPSVTLVDNGEQAESRFSEFCKNELALEEKSCKEAMDLFGETKHLLIANVSSLGNGTSEDAERLWFAFILYSIKRLIQKNEENVNEETKNTGLTLCRILRAAKLNIADFFKELPQFIVKAGPILSNLYGTDWENKLEAKEMHANTIHLKILSKYYKRVFEEFFVSTDANVGNNSSVTVHASEYHRFGWLLFLALRVHAFSRFKDLVTCTNGLISILAILIIHVPTRFRNFNIHDSSRFVKRSSKGVDLLASLCNTYNTSEDELRKTMEKANNLIADILKKKPCLASECETENLENFDKDGLTYFKDLMEESSLPSNLNILENDYDHMTRNKGELDERLFINEDDSLLVSGSLSGGSVSAGGVKRKFDLMTSPVKTFASPLSPRRSPASHAHSIPGSANSKMGATPVSTAMTTAKWLRTVISPLPSKPSQDLERFLTSCDKDVTSDVVRRAQIMLQAIFPSSPLGERCVSGSLHSANLMDNIWAEQRRLEALKLYYRVLEAMCRAEAQMLHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLAVARPALSSEISRLGLLAEPMPSLDEIAMHINFSCGGLPPVPLLPKPEALPTQNGDTRSPKRLCTEQRNVLVERNSFTSPVKDRLLPFSNLKSKLPPPPLQSAFASPTKPNPGGGGETCAETGISIFFSKIVKLGAVRISGMVERLQLSQQIRENVYCLFQRILNQWTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWSSARRNGASCRQRAGQDQIDIISFYNEVFIPSVKPLLVELGPGGSTMRSDRVAEATNKNDGHLANGPGSPRISPFPSLPDMSPKKVSATHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRGPLNFDDVDVGLVSDSMVANSLYLQNGSSASSSGAPLKSEQPDS 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02512 1028 PANTHER BNACNNG22930D PROTEIN 9 1015 - -
Car07g02512 1028 Coils Coil 268 292 - -
Car07g02512 1028 Gene3D - 419 607 - -
Car07g02512 1028 Pfam Retinoblastoma-associated protein A domain 416 617 IPR002720 GO:0005634|GO:0051726
Car07g02512 1028 MobiDBLite consensus disorder prediction 389 415 - -
Car07g02512 1028 Gene3D - 195 353 - -
Car07g02512 1028 Coils Coil 329 349 - -
Car07g02512 1028 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 9 1015 IPR028309 GO:0006357|GO:0051726
Car07g02512 1028 SUPERFAMILY Cyclin-like 739 916 IPR036915 -
Car07g02512 1028 SMART DUF3452_2 88 234 IPR024599 -
Car07g02512 1028 Gene3D - 700 897 - -
Car07g02512 1028 MobiDBLite consensus disorder prediction 1009 1028 - -
Car07g02512 1028 SMART RB_A_2 416 617 IPR002720 GO:0005634|GO:0051726
Car07g02512 1028 Pfam Retinoblastoma-associated protein B domain 741 873 IPR002719 GO:0005634|GO:0051726
Car07g02512 1028 Pfam Domain of unknown function (DUF3452) 99 234 IPR024599 -
Car07g02512 1028 SUPERFAMILY Cyclin-like 424 619 IPR036915 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR RB Car07g02512 RB_A 4.8e-65 CL0065