Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02484 ATGAAGAAGAAGCTCGATACCCGTTTTCCTGCTGCTCGGATAAAGAAGATAATGCAAGCGGACGAGGATGTTGGAAAGATAGCACTGGCTGTGCCTGTTTTAGTTTCTAAAGCTCTAGAGCTATTTCTGCAAGATCTTTGTGACCGTACTTATGAAATTACTCTTCAAAGAGGAGCAAAAACCATGAATTCATTGCATTTAAAACATTGTGTACAAAGCTATAATGTCTTTGACTTTCTGAAGGATGTAGTAAGCAAGGTTCCCGACTACGGCCATGGTCATGGCCATACTGATGCTGGTGCTGCTGACGATCAGGCCATTTCAAAAAGAAGAAAAGCTATAGGTGATGATTGTAATGACAGTGATGAAGAAGCTAAGAGGGGCAAGATGGTTGAGTTGAGCCACGCTAGCCCTACTggtaggggcagaggccgaggtagaggaagaggccgtggtcgaggtcgaggATCTCGAGCTACACTAAGAGAGGGACATCTTCCGGAGACTGAATCTGAACCCTTTCCGCCTGTTCAACAAGTTAACCAGCATACTACAGATACAAATGTGGAGGGTAAACACGATGACGTGACTCACTCGGAGTCAAAGGAGGAATTACCAAAGGAGAACATTGTGGCTCCTGTTGAAAATTCCGACTCACTCCGTAACATCGATCTGAATGCCAATATGAACGAAACCGATGACAAAAAGGCCAGCGCAGTTGCTAATCCTGCTCCCGCAGCCACTAATCCCGCTCCGACAACCGCTAATACCTCATTGTCTGAACCACCTCATATAGACGACAGCAATCATGAAGAAATGCCGGGCTGGTCCCTTTCTGAGGTGGACAAGATGGCCATCGATTCGATGCAGCTTGCACAACTCGGTACGCGAATGGAAGAGGATGATGAAGATTATGACGAAGAAGGTTAA 930 0.428 MKKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYNVFDFLKDVVSKVPDYGHGHGHTDAGAADDQAISKRRKAIGDDCNDSDEEAKRGKMVELSHASPTGRGRGRGRGRGRGRGRGSRATLREGHLPETESEPFPPVQQVNQHTTDTNVEGKHDDVTHSESKEELPKENIVAPVENSDSLRNIDLNANMNETDDKKASAVANPAPAATNPAPTTANTSLSEPPHIDDSNHEEMPGWSLSEVDKMAIDSMQLAQLGTRMEEDDEDYDEEG 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02484 309 SUPERFAMILY Histone-fold 3 89 IPR009072 GO:0046982
Car07g02484 309 MobiDBLite consensus disorder prediction 247 263 - -
Car07g02484 309 MobiDBLite consensus disorder prediction 187 208 - -
Car07g02484 309 MobiDBLite consensus disorder prediction 113 131 - -
Car07g02484 309 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 308 - -
Car07g02484 309 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Car07g02484 309 MobiDBLite consensus disorder prediction 113 208 - -
Car07g02484 309 MobiDBLite consensus disorder prediction 230 274 - -
Car07g02484 309 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Car07g02484 309 PANTHER HISTONE SUPERFAMILY PROTEIN 1 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02484 Car-Chr7 46661227 46664776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02484 1 298 CCAAT-HAP5 Transcription Factor Family AT3G12480 48.544 8.39e-77 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Car07g02484 CBFD_NFYB_HMF 2.4e-19 CL0012