Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02482 ATGTCTCCATCAATGAAATCAAAATCCAAGTCCAAGGAGAAGGCTTCTGCAAAGGCTTCTAAGGAACAACACAAGACTTCTCCAAAGACTTCTGGATCTGCTAATGATGCGAGCAGTGTTCCCTCTATCGCGATCGATCCTATCCTGGAAACTGTTCCAACCCTAGAAACGTCGTTGGTTGATTCTTCTGCCATAGTTAACAACAGTCAATTCCCAAAAATAAACGATATGGATGAGCATTCTAATAGTCCACAAGGTACGGTGTCTGAGTACGATTCGGTTTCTAATAATGGCAGCTGTTCTGGTGAATCAGAAGACACTAAAGAGAAAGTTGCAAACTCCTCGACCCGGTTGGATATCATACCTGGTTGTGATAACGACAGAAGGGATAAGATCCGCCTGAAGAATGAGAGGAAGCACCAAAGGCAGAGGGAAAGGAGAGCTCACGAGTTGCACGACCGGTGCGGTGCCTATCTAATGTCGAGGAAGCTTGAAAACCTTGTGCAGAAGTTAGTCGCGATGGGATTCTCTTCTGAGCGAGCGACACTGGCTTTGAAGTTAAATGAAGGCAAATTAGAAGAATCGATATCGTGGCTGTTTGAAGGAAGTGAAGCAAAGGATACTACCAACGTTGTAAGCGAGAGTAATTTGAAAATCGACATAAGTGAAGAGCTTGAGCAGATTTATGCTATGGAAGTGAAGTACAATTGTTCGAAACAAGAAGTTGAAAGAGTAGTTGTTGCATGTGAAGGCGATCTTCAGAAGGCTGAAAGTACCTTAAAATCTCAGAAGCAAGAATCTCCTGTAAATCAGTCAGAAGATTCTTCTCAAGATAATAATTTGATGAGATCTCATGGATTACAAGCAGCTTCAGTTTCAATTCAGCAGAGAGGGAATGAAAGTGATTTCAACTATTACAATGTTTGCGGTGCTGATTCTATGTTCCAAGATCCCAAAAGTAGAAATCAACAGGCTCTACACATGGATCATCAAAATGAACTGGCACAGAAAAGATGGGGTGTTAGTGTTGCTGCATCAAATCCTTCCAATATGTTAACTATGTCACAGTCCATGCAAGCAATCTCTCCATTTGTTAAAATGGAAGCGCAGCCTAGCGCATATAGGAATGAAGGAAGAATGATTCATCAAGGAGTAGGAAGGGAGCAGGTAGTGATGATGCAGCACTCGCAATTCGCAGACGCGAAACAGAATTATCTGAATTCTATGAATTCCATACCTTCAGGAACATCTGGTTGGTATGTAAATAGTGTTCCGGCATATGAAAATTCGAGGTCAAACGGGAATTTCCTACTACAAAATCACAACACTGGAAATGTCAGTGCGGATCGCTTGCAGCAACTTTGCCAAGCTCCTTACAAAGAATATTCCCATGCATTCGGACCAGTAGATTCCTCAATCTCATCATCTGGAATGGGAGGTTTCTATAAACCGATGGTTGCATCGTCGCCTTCGCATACAATGTCTTCTCACTCTCAACATCATGGTTCGTGGAACACTGGCGCCGCATCTTCACCTGCACTTACAGTTCCGCCGTCTCTCGGCCTATTTTGTGGGCATCAGAATCCATCGGCTAGATCACTCAACTCACATTCACGTGTGGATTGGAATACCGGGGGCATGGTACAAGAATTCGACTACAACAGTATAGATTGGAGTTTGGATTGCCCGGCGTCATCAAGATCAGGTGATGTTTGGCTAGGGATCTCATCATTGTTGAGAAACGGAGCCGGGAATAGGATGGCCACCAATTCTTACATGTCTGGATCACGAAATGTTGGCACGGCGAGGGAAACTTCGTCGTCTGCTGGATTAAGAGATTGGACCACACCTTTTGCTGGAAAGGATATATTCAGTGTTCCAAGGCAGTTTGTTACTTTTCCTCCGCTGTAG 1911 0.4375 MSPSMKSKSKSKEKASAKASKEQHKTSPKTSGSANDASSVPSIAIDPILETVPTLETSLVDSSAIVNNSQFPKINDMDEHSNSPQGTVSEYDSVSNNGSCSGESEDTKEKVANSSTRLDIIPGCDNDRRDKIRLKNERKHQRQRERRAHELHDRCGAYLMSRKLENLVQKLVAMGFSSERATLALKLNEGKLEESISWLFEGSEAKDTTNVVSESNLKIDISEELEQIYAMEVKYNCSKQEVERVVVACEGDLQKAESTLKSQKQESPVNQSEDSSQDNNLMRSHGLQAASVSIQQRGNESDFNYYNVCGADSMFQDPKSRNQQALHMDHQNELAQKRWGVSVAASNPSNMLTMSQSMQAISPFVKMEAQPSAYRNEGRMIHQGVGREQVVMMQHSQFADAKQNYLNSMNSIPSGTSGWYVNSVPAYENSRSNGNFLLQNHNTGNVSADRLQQLCQAPYKEYSHAFGPVDSSISSSGMGGFYKPMVASSPSHTMSSHSQHHGSWNTGAASSPALTVPPSLGLFCGHQNPSARSLNSHSRVDWNTGGMVQEFDYNSIDWSLDCPASSRSGDVWLGISSLLRNGAGNRMATNSYMSGSRNVGTARETSSSAGLRDWTTPFAGKDIFSVPRQFVTFPPL 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02482 636 Coils Coil 246 266 - -
Car07g02482 636 MobiDBLite consensus disorder prediction 7 25 - -
Car07g02482 636 SUPERFAMILY UBA-like 165 207 IPR009060 GO:0005515
Car07g02482 636 Gene3D - 127 216 - -
Car07g02482 636 PANTHER UBIQUITIN-ASSOCIATED/TRANSLATION ELONGATION FACTOR EF1B PROTEIN 1 635 - -
Car07g02482 636 MobiDBLite consensus disorder prediction 489 510 - -
Car07g02482 636 SMART uba_6 164 201 IPR015940 -
Car07g02482 636 MobiDBLite consensus disorder prediction 1 41 - -
Car07g02482 636 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 162 202 IPR015940 -
Car07g02482 636 MobiDBLite consensus disorder prediction 72 122 - -
Car07g02482 636 PANTHER DOMAIN PROTEIN, PUTATIVE-RELATED 1 635 - -
Car07g02482 636 MobiDBLite consensus disorder prediction 26 40 - -
Car07g02482 636 MobiDBLite consensus disorder prediction 258 280 - -
Car07g02482 636 MobiDBLite consensus disorder prediction 72 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02482 Car-Chr7 46588711 46590621 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02482 7 266 EF-hand Containing Proteins AT5G12120 52.075 1.83e-72 243