Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02478 ATGAGCATTATGAGGTTTCATAGcttcatgctccttctcatcattttcttcttcttcttcttcAAACTAACAACTTCACAATCTCCAATTTCATTGATCAGTTTTTGCCAAAACTCATCTGTATCAAAACCTCTCACCAATTCATACAAAACCAACGTTAAAAACCTCCTCTCATGGATGAACACTATTTCTTCCACAGGCCAAGAATCCAACCACACCTCCTTCGGAGACAAAAAAACTCATGATGTTGTTTATGGTAAATACGACTGTCGCGGCGACATCCCTGAATATTTTTGCCAATTCTGTGTAAACAATGCTGCTAGAGAAATTTCTCAACGTTGTCCAAACAGTGTATCAGCTGTTATATTTTATGACATGTGTATAATTCGTTACACTGACAATAATTTCTTTGGAAAAATTGTTTTAACTCCATCATTTAATATTACTGGAACAAAGTTCATAAAGGATTCAAAAGAATTTGAGAGAGCAGAGTATTTTATGAGGAGATTGATAAGAAATGCGACAGAGGCGAACCGGTCGTGGGGGACGGGTGAGTTTGATTGGAATGATAGTGAGAAAAGGTATGGTTTGGTTCAGTGTGCTGGAGATCTTGATATTGATGTGTGTGGAGAGTGTTTGGAGGATTTGATAGATATGGTTAGTAAGTGTTGTAGGAGTAAGGAAACATGGGCTATTGTTGCTCCAAGTTGTGGGATTAAGTTTGATGATAAAATGTTTTATCAGTTATCTCAGCAGACAGGGTCGTCTTCTATGCCGAATCCGGCCAAGCAGGAAGGTTCAAGTGACAAAAAAACCTTGATCATCAGCTTAATAAGTGTACTGGTGACAGTAGCTTTACTAAGTTGTTGTGTCTACTACTCCTGGAGAAGGAATTGGTTATGTAGAGGTGAATTGCTGTTGAGGACCATTCCTAGAGCTTTTCATGATCATGTTCAAAGAGAGGATTCATTGAATGGAGTCCTTCAAACAATCCCTTTAATTGTAATCCAACAAAGTACTAATTGGTTTTCAGAGTCAACTAAATTAGGCGAAGGCGGATTTGGCTCGGTTTACAAGGGTACTTTACCAGATGGGACGGAAATTGCGGCCAAAAGGCTTGCAGAAACGTCTGGTCAAGGTTTAGAGGAGTTCAAGAATGAAGTGATTTTCATAGCTAAACTACAACATAGAAACCTTGTGAAACTCTTGGGTTGCTGCTTTGAAGAAAATGAAAAGATACTAGTATATGAGTACATGCCAAATTCAAGCCTTGACTTTCACCTTTTCAAAAAGGAAAATCAAAATCAACTAGATTGGAAATTACGACTAAGCATTATCAATGGAATTGCAAGAGGACTATTATACCTTCACGAGGATTCACGACTAAGAGTTATCCATAGAGATTTGAAAGCTAGTAATGTTCTTCTGGACGATGAAATGAATCCAAAAATATCAGATTTTGGATTGGCAAGAAAGTTTGAAAAAGGCCAAAGTCAAACAGAAACAAAAAGAGTTATGGGCACCTACGGATACATGGCTCCAGAATATGCTATGGCTGGACTATTTTCAGTTAAGTCTGATATTTTCAGCTTTGGAGTTCTGATATTAGAAATCATTTATGGAAAAAGGAATGGTGAATTCTTTCTTTCGGAACATAGGCAAAGTCTTCTCTTACATGTGAGTTTCATTAATCACATATAA 1701 0.3651 MSIMRFHSFMLLLIIFFFFFFKLTTSQSPISLISFCQNSSVSKPLTNSYKTNVKNLLSWMNTISSTGQESNHTSFGDKKTHDVVYGKYDCRGDIPEYFCQFCVNNAAREISQRCPNSVSAVIFYDMCIIRYTDNNFFGKIVLTPSFNITGTKFIKDSKEFERAEYFMRRLIRNATEANRSWGTGEFDWNDSEKRYGLVQCAGDLDIDVCGECLEDLIDMVSKCCRSKETWAIVAPSCGIKFDDKMFYQLSQQTGSSSMPNPAKQEGSSDKKTLIISLISVLVTVALLSCCVYYSWRRNWLCRGELLLRTIPRAFHDHVQREDSLNGVLQTIPLIVIQQSTNWFSESTKLGEGGFGSVYKGTLPDGTEIAAKRLAETSGQGLEEFKNEVIFIAKLQHRNLVKLLGCCFEENEKILVYEYMPNSSLDFHLFKKENQNQLDWKLRLSIINGIARGLLYLHEDSRLRVIHRDLKASNVLLDDEMNPKISDFGLARKFEKGQSQTETKRVMGTYGYMAPEYAMAGLFSVKSDIFSFGVLILEIIYGKRNGEFFLSEHRQSLLLHVSFINHI 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02478 566 Pfam Salt stress response/antifungal 156 243 IPR002902 -
Car07g02478 566 Pfam Salt stress response/antifungal 36 133 IPR002902 -
Car07g02478 566 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 559 - -
Car07g02478 566 SMART serkin_6 343 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02478 566 SUPERFAMILY Protein kinase-like (PK-like) 324 544 IPR011009 -
Car07g02478 566 Pfam Protein tyrosine and serine/threonine kinase 346 541 IPR001245 GO:0004672|GO:0006468
Car07g02478 566 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Car07g02478 566 ProSiteProfiles Gnk2-homologous domain profile. 141 246 IPR002902 -
Car07g02478 566 PANTHER PROTEIN KINASE DOMAIN 21 559 - -
Car07g02478 566 Gene3D - 30 136 IPR038408 -
Car07g02478 566 Gene3D - 145 246 IPR038408 -
Car07g02478 566 ProSiteProfiles Gnk2-homologous domain profile. 30 136 IPR002902 -
Car07g02478 566 Gene3D Phosphorylase Kinase; domain 1 310 418 - -
Car07g02478 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Car07g02478 566 CDD STKc_IRAK 349 543 - -
Car07g02478 566 Gene3D Transferase(Phosphotransferase) domain 1 419 564 - -
Car07g02478 566 ProSiteProfiles Protein kinase domain profile. 343 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02478 Car-Chr7 46460036 46463097 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02478 6 560 Receptor kinase-like Gene Family AT4G05200 40.210 3.91e-135 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car07g02478 PK_Tyr_Ser-Thr 4.3e-47 CL0016