Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02477 ATGATAGTATACTACTCCATGGAAAGAACAAAATTAAATTTAATATCAATAATTTTTTGTTTCCTACTTTTTCTAAGCTTCAAACAACTCATTACAAAAGCTCAATCACCTACTTATGTTGGAGATGATTGTAATTACACAAAACCAAAACCTCTAACCAATGCATACCAAACAAATCTCAACAGCATCCTCTTAAATCTATCCAATGATGCAGCAACAAGCAAAGGCTATAACTACACAAGCATAGGAGACAACAACACAACCAAAGTGTACGGCCTCTATGATTGTCGTAGTGATGTTGTTGGATTCTTTTGTCAATTTTGTGTTGCTGCTGCTACAAGAGAAGTTCTTCAGCGTTGTCCTAATAGAGCCTCTGCTACTATATTTTTTACCATTTGCATTTTAAGGTACTCAAATGAGAATTTCTTTGGGAAAGTTATTACATACCCTGCATGGAATCATTTAGGAGACAAAAATGTCTCTAGTGTAGTAGAGATTCAGAAAGGTGAGGATTTCATGAAAGGTTTAATTAGAAAAGCAACTAATCAGACCAACCAATTGTTCTACATGGATGGTTTCAATTTGAGTTCTACTCAGAGAAGGTATGGTCTGGTTCAATGCACTAGAGATCTTACAAATGAAGGGTGTGGACAGTGTTTAGAGACTCTGTTATCAAAAATTCCTAAATGTTGTGAGCATAAGTTGGGATGGCAGGTTGGATGTGTTAGCTGTTTGATAAGGTATGATGAGAATATGTTCTATCTCCACAATCAATCACCTTCACCTTCAGTACAAGCTGATCCACAAACAGGTTGGCTGACACCTGCATATGAGGAAATACTGAATGCAGACCTGCCAACAATTCCATTGATCACAATTCAACATTGTACTGGTAACTTTTCAGAAACATCTAAATTAGGGGAAGGTGGATTTGGCTCTGTTTACAAGGGAATTTTGCCAGATGGAAGAGAAATAGCAGTCAAAAGACTGTCAAGTAGTTCTGGTCAAGGATCAGAGGAGTTCAAGAATGAAGTAATGTTTATAGCTAAATTGCAACATCGAAACCTTGTAAGACTTTTGGCATGCTGCTTGGAAGGAAATGAAAAGCTACTTGTATATGAGTTTATGCCCAATGCAAGTCTAGACTTTCACCTATTTGATGATGAAAAAAGAAAGAAACTTGATTGGAAACTAAGTTTGAGCATTATCAATGGAATAGCAAAAGGTCTTCTATACCTCCATGAGGATTCTCGACTAAGGGTAATTCATAGAGATCTCAAAGCTAGCAATGTTCTATTAGATCATGAAATGAATCCCAAAATATCAGATTTTGGATTGGCAAGGGCATTTGATATAGGCCAAATCCAAGCAAATACAAGAAGAATAATGGGCACTTATGGATACATGGCACCAGAATACACAATGGAAGGAGTATTTTCTGTAAAATCTGATGTATTCAGCTTTGGAGTACTAGTTTTGGAAATCATTAGTGGAAAAAAGAATAATGGATTCTATCTGTCAGAAGGACATGGTCAAAGTCTTCTTTTATATACATGGAAAAAATGGTGCGAAGGTAATTGTTTGGAATTGATGGATTCAGTACTTGAAAAATCCTGCATACACAATGAAGTTGTGAGGTGCATAAACATTGGTCTATTGTGTGTTCAAGAAGATGCAGCAGATAGACCAACCATGTCAAATGTTGTTGTAATGTTGGCTAGTGACACAATGACCCTTCCAAAACCCAAACACCCTGCATTTTCAATTGGAAGAATGACCAATGAGGATGCATCTACCTCAAAAAGTTTCAAGGATCCTTCCAATAATGATGTAACAATCTCAAACATATTACCCCGATAG 1860 0.3645 MIVYYSMERTKLNLISIIFCFLLFLSFKQLITKAQSPTYVGDDCNYTKPKPLTNAYQTNLNSILLNLSNDAATSKGYNYTSIGDNNTTKVYGLYDCRSDVVGFFCQFCVAAATREVLQRCPNRASATIFFTICILRYSNENFFGKVITYPAWNHLGDKNVSSVVEIQKGEDFMKGLIRKATNQTNQLFYMDGFNLSSTQRRYGLVQCTRDLTNEGCGQCLETLLSKIPKCCEHKLGWQVGCVSCLIRYDENMFYLHNQSPSPSVQADPQTGWLTPAYEEILNADLPTIPLITIQHCTGNFSETSKLGEGGFGSVYKGILPDGREIAVKRLSSSSGQGSEEFKNEVMFIAKLQHRNLVRLLACCLEGNEKLLVYEFMPNASLDFHLFDDEKRKKLDWKLSLSIINGIAKGLLYLHEDSRLRVIHRDLKASNVLLDHEMNPKISDFGLARAFDIGQIQANTRRIMGTYGYMAPEYTMEGVFSVKSDVFSFGVLVLEIISGKKNNGFYLSEGHGQSLLLYTWKKWCEGNCLELMDSVLEKSCIHNEVVRCINIGLLCVQEDAADRPTMSNVVVMLASDTMTLPKPKHPAFSIGRMTNEDASTSKSFKDPSNNDVTISNILPR 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02477 619 Pfam Salt stress response/antifungal 173 250 IPR002902 -
Car07g02477 619 Pfam Salt stress response/antifungal 51 139 IPR002902 -
Car07g02477 619 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 277 617 - -
Car07g02477 619 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 25 260 - -
Car07g02477 619 Gene3D Transferase(Phosphotransferase) domain 1 376 581 - -
Car07g02477 619 SUPERFAMILY Protein kinase-like (PK-like) 287 602 IPR011009 -
Car07g02477 619 Pfam Protein tyrosine and serine/threonine kinase 303 571 IPR001245 GO:0004672|GO:0006468
Car07g02477 619 Gene3D Phosphorylase Kinase; domain 1 273 375 - -
Car07g02477 619 ProSiteProfiles Gnk2-homologous domain profile. 37 142 IPR002902 -
Car07g02477 619 Pfam Domain of unknown function (DUF3403) 574 619 IPR021820 GO:0004674
Car07g02477 619 MobiDBLite consensus disorder prediction 592 619 - -
Car07g02477 619 MobiDBLite consensus disorder prediction 585 619 - -
Car07g02477 619 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 260 - -
Car07g02477 619 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 277 617 - -
Car07g02477 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Car07g02477 619 ProSiteProfiles Gnk2-homologous domain profile. 148 253 IPR002902 -
Car07g02477 619 Gene3D - 159 253 IPR038408 -
Car07g02477 619 Gene3D - 38 142 IPR038408 -
Car07g02477 619 ProSiteProfiles Protein kinase domain profile. 300 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02477 619 CDD STKc_IRAK 306 572 - -
Car07g02477 619 SMART serkin_6 300 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02477 619 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02477 Car-Chr7 46454913 46459185 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02477 18 619 Receptor kinase-like Gene Family AT4G05200 42.113 5.73e-169 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car07g02477 PK_Tyr_Ser-Thr 7.7e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00223 05 5368244 5372178 Car07g02477 07 46454913 46459185 PCT