Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02472 ATGAAGACGTCACAACAAAACATGACATGTACAAGGTGTCTAAGCTTCATTCTCCTTCTCAACTTCCTCTTCACCTTAACAAGTGCAGAACAATCACCATTTTACATGTACAGTTTTTGCCAGAACTCAACACAGAAAACACCTAACCCTTCACACCAGTCCAACGTTAATAACTTCCTTTCATGGATAAACTCTGATTCTGCATCAGGAACAGTATCTAACCACACCACCATTAGCAGCAAAAACAATCGTGATGATGATGATGTTTATGGGTTCTATGATTGTCGGGGAGATGTCACAGTAAGTTTCTGTCAATTCTGTCTCAACATTGCTGTCGGAGAAATTCCACAACGTTGTCCCAACGGTGTCTCATCTATGATATGGTTTGACGTATGCATCGTCGGTTACACTAACAAGAATTCCACAGGAGAAGTTTCTGTAGCCCCGTCATGGAATGTTACAGGATCTAAAACCGTTAAGGACTCAACAGAACTTGCGAAAGCAGAGAATAACGTGAGGAGTTTGATAGATAGTGTGACTACAGAAGGCAATCTCAATTGGGCATTGGGCGCGTTCAGTTGGAGTAACACTGTGAAAAGGTATGGTTGGGTGCAGTGTAATAGAGTCCTCAGTAAGAATGGATGCAAACAGTGTTTGGAGGCTATGATGGATTTAGTTCCTAAGTGCTGTGGAACAAAGGTAGGTTGGGCAGTTATGTCACCTAGTTGTGGGGTGAAGTATGATGATTATAGGTTCTACCAGGTTAATAACCAAACAGGATCTCGTTCTCCTATGCCGATTCCAGACAAGCAAGAAGGTGCAAGTAATACCAAAACCTTGATCATCACCTTAGTAAGTGTACTGGTGGCAGTGTCTATTCTAAGTTGTTGTATCTACTATTGCTGGAGAAAGAATGGGTTATGTAAAGGTGGTTTTCTGTTCAGGACTATAGCTTTTCATGATCATGTTCAAAGAGAGGATCCATTGAATGGAGACCTTCCTACAATCCCTTTAACTGTAATTCAACAAAGCACCAATAACTTTTCAGAGTCATCTAAATTAGGAGAAGGTGGATACGGCCCTGTTTACAAGGGTACTTTACCAGATGGCACAGAAGTTGCTGTCAAAAGGCTTGCAGAGTTGTCTGGTCAAGGTTCAGAGGAGTTCAAGAATGAAGTAATCTTCATAGCTAAATTGCAACACAGAAACCTTGTGAAACTCTTGGGTTGCTGCATTGACGGAAATGAAAAAATACTAGTATATGAGTACATGCCAAATTCAAGCCTTGACTTTCACCTTTTCAATAAGGAAAAGCAAAGGCAACTAGATTGGAATTTACGACTATGCATTATCAATGGAATCGCAAGAGGATTGTTGTACCTTCATGAGGACTCTCCACTTAGAGTAATCCATAGAGATCTGAAAGCCAGCAATGTTCTTCTGGATGATGAAATGAATCCAAAAATATCAGATTTTGGATTGGCAAGGACATTTGAAAAAGACCAATATCAAACAAAAACAAAAAGAGTTATTGGCACCTATGGATACATGGCTCCAGAATATGCCATGGCTGGGATATTTTCAGTGAAATCTGATGTTTTCAGCTTCGGAGTTCTTTTATTAGAAATCATTTATGGAAAAAGAAATGGTGAATTCTTTCTTTCAGAACATATGCAAAGTCTTCTATTATATGTAAGGTTTCCTAATCACATCTCATCAACAAATTGA 1728 0.3947 MKTSQQNMTCTRCLSFILLLNFLFTLTSAEQSPFYMYSFCQNSTQKTPNPSHQSNVNNFLSWINSDSASGTVSNHTTISSKNNRDDDDVYGFYDCRGDVTVSFCQFCLNIAVGEIPQRCPNGVSSMIWFDVCIVGYTNKNSTGEVSVAPSWNVTGSKTVKDSTELAKAENNVRSLIDSVTTEGNLNWALGAFSWSNTVKRYGWVQCNRVLSKNGCKQCLEAMMDLVPKCCGTKVGWAVMSPSCGVKYDDYRFYQVNNQTGSRSPMPIPDKQEGASNTKTLIITLVSVLVAVSILSCCIYYCWRKNGLCKGGFLFRTIAFHDHVQREDPLNGDLPTIPLTVIQQSTNNFSESSKLGEGGYGPVYKGTLPDGTEVAVKRLAELSGQGSEEFKNEVIFIAKLQHRNLVKLLGCCIDGNEKILVYEYMPNSSLDFHLFNKEKQRQLDWNLRLCIINGIARGLLYLHEDSPLRVIHRDLKASNVLLDDEMNPKISDFGLARTFEKDQYQTKTKRVIGTYGYMAPEYAMAGIFSVKSDVFSFGVLLLEIIYGKRNGEFFLSEHMQSLLLYVRFPNHISSTN 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02472 575 ProSiteProfiles Protein kinase domain profile. 348 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02472 575 Gene3D Transferase(Phosphotransferase) domain 1 424 572 - -
Car07g02472 575 CDD STKc_IRAK 354 548 - -
Car07g02472 575 PANTHER PROTEIN KINASE DOMAIN 25 564 - -
Car07g02472 575 SUPERFAMILY Protein kinase-like (PK-like) 334 549 IPR011009 -
Car07g02472 575 Pfam Protein tyrosine and serine/threonine kinase 351 547 IPR001245 GO:0004672|GO:0006468
Car07g02472 575 Pfam Salt stress response/antifungal 167 250 IPR002902 -
Car07g02472 575 Pfam Salt stress response/antifungal 40 138 IPR002902 -
Car07g02472 575 ProSiteProfiles Gnk2-homologous domain profile. 147 252 IPR002902 -
Car07g02472 575 Gene3D - 33 140 IPR038408 -
Car07g02472 575 Gene3D - 151 252 IPR038408 -
Car07g02472 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Car07g02472 575 ProSiteProfiles Gnk2-homologous domain profile. 34 141 IPR002902 -
Car07g02472 575 Gene3D Phosphorylase Kinase; domain 1 315 423 - -
Car07g02472 575 SMART serkin_6 348 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02472 575 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02472 Car-Chr7 46391691 46397968 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02472 22 565 Receptor kinase-like Gene Family AT4G05200 41.637 4.37e-146 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car07g02472 PK_Tyr_Ser-Thr 7.9e-49 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00221 05 5347301 5353224 Car07g02472 07 46391691 46397968 PCT