Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02458 ATGTCTGGTGAATCGCAGAGGGTTGTGGTGATCCACCATTCATCAAGAGACTTTAGTGCAAAAGCTCTTAAATGGGCCCTCAGTGGCTTTTCACTTGAACATGGTGATAACCTTACACTTCTTGCAATTCTTCGCCGTGTAAACAGTCCTTCCAGTGCTAGATTTCGGGCAATATTTGGGAGTGATCAGAATGTTGTTGAAGAAGAGGTTGCAAAGAAGAAAGAAAAGCTGCATAATGATCCATGCATCAGAAAAATTTCTGAGCAGTGTGAAACAAACAAGATTCAGTTCTTGATTGAAGTGCTTCCAGGAAAGTTACCAGAGCTTGCTGTAAACGCTGCAATCAGTTTGAAGGCAACGTCAGTTATACTTGATAGGGACATGAAGAAATATAAGACAGATTTCATGCAGAGTCTCTCTTGTGCTTTGCTAATAATGAAACGTGATAACTCCATTAAGCACTTGAGAGGGCCAAGGAAAACAAAGATTTCTTTTAGAGGATATGACAAAGCAAGTTCTGTAAAACGTCCCGAATCCACATCGAGTTTGCAACGCATGACAAATGCCGTTTTCTGCTCCAAATCGAGCTCTGATCTTTCTAAGGTCGCGTGTCATCGACTTCATTGTCAAACAAAACAAACCCCTGAAGACAAAGATCTTGATATGGCAAGAGGGTATTGCCTATTACCTATTCAAGACATTCAAAAGACAAGTAGTGTTCCTCAAATGCATCAGAAGGAGACAACATTTGAACATAGAAGCAAGAAAGAAGCATATCAAAAAGTTGAAAAGTTTAAAAATTCTGTTTGTTCAGTGTGTGAGAACACAAGGCCAAAATTTGAGTTGATGAAAGAATTCACATATGGGGAGTTGCATGAAGCAACACATGGTTTTTCACCAAAGAACTATTTATCAGAAGGTGGATTTGGTTCTGTTTATTGGGGAAAGTTGCAAGGAATTAAGATTGCTGTTAAGAGACATAAGTTTGCAAGCTTACAAGGAGAGAAGGAATTCAAATCTGAAGTTAATGCACTTAGCAAAGCAATGCATGAAAATGTGGTCATGCTTCTAGGATCTTGTTCTGAGGGAATTAACAGATTTCTTGTTTATGAATTTGTTTGCAATGGCTCACTTGATCAACATTTATCGCAACACTCTAGAAAACCTCTTAATTGGCCAGAGAGGATAAAAGTGGCTATTGGAGCTGCAAAAGGCTTATTGTATTTGCATGAGAATAATATAATACATAGAGATGTGAGACCAAGTAACATCCTTGTGACACATGATTATGAAGCAATGCTGGGAGATTTTGGACTGGCTAGAACTGAACAAATGGACTCTGTGTACTCAACAGATGTTGTTGGAACTTTAGGGTATATGGCACCAGAATATGCAGAATCTGGCAAAGTGTCAACCAAATCAGATGTGTATTCTTTTGGTGTGGTGCTTCTTCAATTAATAACAGGAATGAGGACCACAGACAAAAGGATTGGACACAAAAGTCTTGTGGGATGGGCTAGGCCACTACTGAAGGAAAGGAACTATCCAGATCTAATTGATGAAAGGATGATGGATACTTATGATTGTCACCAGCTTTTTTGGATGATTCGACTAGCCGAAAAATGTCTCACCAGAGATCCTCAGAAGCGATTACCAATGGATACAGTGGTTAGTGCATTAACTCATATAGTAGAAGGCAACACATGTAGCATGGTACTAAGAGATTGCTCTCCAGCACGGTCAGATTCATCCTATGACTACATGTCAGAATCTCCAATATCATATGTCTCTCCAGAATTACAAGTACATCAAGATGGAATCCTCTGTGTAGGATGTAACATGGTCAATTTAAGACCCCCACCATCTCCTCCATTTGGAAGCACAGGCACTTCTTGGAGTACTACTACATCCACCAAGCATGCATGTTCACAAGGCTGA 1938 0.3968 MSGESQRVVVIHHSSRDFSAKALKWALSGFSLEHGDNLTLLAILRRVNSPSSARFRAIFGSDQNVVEEEVAKKKEKLHNDPCIRKISEQCETNKIQFLIEVLPGKLPELAVNAAISLKATSVILDRDMKKYKTDFMQSLSCALLIMKRDNSIKHLRGPRKTKISFRGYDKASSVKRPESTSSLQRMTNAVFCSKSSSDLSKVACHRLHCQTKQTPEDKDLDMARGYCLLPIQDIQKTSSVPQMHQKETTFEHRSKKEAYQKVEKFKNSVCSVCENTRPKFELMKEFTYGELHEATHGFSPKNYLSEGGFGSVYWGKLQGIKIAVKRHKFASLQGEKEFKSEVNALSKAMHENVVMLLGSCSEGINRFLVYEFVCNGSLDQHLSQHSRKPLNWPERIKVAIGAAKGLLYLHENNIIHRDVRPSNILVTHDYEAMLGDFGLARTEQMDSVYSTDVVGTLGYMAPEYAESGKVSTKSDVYSFGVVLLQLITGMRTTDKRIGHKSLVGWARPLLKERNYPDLIDERMMDTYDCHQLFWMIRLAEKCLTRDPQKRLPMDTVVSALTHIVEGNTCSMVLRDCSPARSDSSYDYMSESPISYVSPELQVHQDGILCVGCNMVNLRPPPSPPFGSTGTSWSTTTSTKHACSQG 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02458 645 Gene3D Transferase(Phosphotransferase) domain 1 373 577 - -
Car07g02458 645 PANTHER OS01G0253100 PROTEIN 7 627 IPR045271 GO:0004714|GO:0006468
Car07g02458 645 ProSiteProfiles Protein kinase domain profile. 298 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02458 645 MobiDBLite consensus disorder prediction 623 645 - -
Car07g02458 645 SUPERFAMILY Protein kinase-like (PK-like) 283 593 IPR011009 -
Car07g02458 645 Gene3D Phosphorylase Kinase; domain 1 269 372 - -
Car07g02458 645 Pfam Protein tyrosine and serine/threonine kinase 302 560 IPR001245 GO:0004672|GO:0006468
Car07g02458 645 MobiDBLite consensus disorder prediction 627 645 - -
Car07g02458 645 ProSitePatterns Tyrosine protein kinases specific active-site signature. 414 426 IPR008266 GO:0004672|GO:0006468
Car07g02458 645 SMART tyrkin_6 298 560 IPR020635 GO:0004713|GO:0006468
Car07g02458 645 PANTHER TYROSINE KINASE FAMILY PROTEIN 7 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02458 Car-Chr7 45970598 45976270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02458 286 574 Trihelix Transcription Factor Family AT5G38560 44.702 7.81e-76 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Car07g02458 PK_Tyr_Ser-Thr 2.2e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00191 05 4617706 4622350 Car07g02458 07 45970598 45976270 PCT