Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02448 ATGATGGAAGACAACACCGTTCATGCATCAGATTCAGTTGACAAATCTAAGATTATAGAAGCAAAACCCTTGCGTAGTTTAGCTCCTGTGGTTCCAAAATGTATTCAATCTTTTTCCTCTGGTAATTATCCATATGGGTTTCCTCCATTTTATTCATTGGAGAAACCCCATGAAAATCCTATTCCAAAAGGAGCTCAAGAAACTCATGTTAATGCCACAGCAACAGAAGAAGATACTCCTGTTGATGCTAAAGTAACTAAAGAAAGTCCTGTTGCTGCTAAAGCGACTCCAATTAGGTTCTACAAGAGTTCACATGATGAAGAGGTGAACACACAAGCCGATGGAGATGTCGGTTTGGAGGGGTTGAATGGTGACTTAGATGATAAACGGAAGCGCTGTGCGAAGAATGTACAGAACTGCAAGGAGTTTCTTAAAAGGAATAAGAAAAATCGGGAGACGCAGGGTGACGATTCGAGTTCTTCGGTTGGTATTAGTCCATTGTTAAAAGATGACGGTGATCGGGAAACGGTTACTCATGTGCTCATGACTTTTGATTCGATTCGGAGAAGGCTATGCCAACTTGAAGAGTCGAAGGAATTGAGTTCAGTGCTTGCTATCAAGCGTGCGGATCTCAGAGCAAGCAATGCCTTGACGTGCAAAGGGGTTCGGACAAATATGAGGAGAAGAGTAGGAGAGGTACCTGGGATTGAGGTTGGAGATGTTTTCTTTTTCCGAATGGAAATGTGTCTTGTGGGTTTGCATGGTCAGTCAATGGGTGGAATTGACTACACGAATATTAAGGATGAGGCTCAGGAGGAACCTGTGGCGTTAAGTGTTGTTTCTTCGGGAGTATATGATGACGATACTGAAGATAATAATATTTTAATTTATAGTGGCCAAGGTGAGAATTTCAACAAAAAAGATAAGCATGTGACTGATCAGAAGCTTCAAAGGGGTAATCTTGCTTTGGACAAAAGTTCGCAAAGGCACAACGAAATTCGAGTCATCCGCGGCTTGAGAGATGCTATGAATAGAAGTGCAAAAATCTATATGTATGACGGTTTGTATAAAATCCAAGATTCTTGGATCGAAAGGGGAAAATCTGGTGGTGGTGTATTTAAGTATAAGTTGGTAAGGTTGCCTGGACAACCGAGTGCTTTTGCGGCTTGGAGATTGGCTCAAAAGTGGATGGCTGGTTCGTCTTCAAGGAATGGTTTTATTCTTGCTGACCTCTCCACAGGAGCTGAAAGTATTCCGGTATCGCTCGTCAATGATGTTGATGGTGAGAAGGGTCCTGCTTTTTTCACTTATTTCCAGTCTCTCAAAAAACCAAAATCTTTTGGTATAGTGCAGCCTTCTTTAGGCTGCCATTGTAACAAAGCATGTGTCCCAGGTGATTTGAACTGCTCTTGCATTCAAAGAAATGGAGGCGATTTTCCTTATGCTGCAAATAGTATTCTGGTGGGCCGGAAGCCACTGATTCATGAATGTGGCCCTATGTGTCAGTGTTTTCCTAACTGCAAAAATCGAGTATCCCAGACTGGTATAAAACAACACATGGAAGTGTTCAAAACAAAGAATAGAGGGTGGGGGCTACGAACCCTCGATCCAATACGTGCCGGTAGCTTTATTTGTGAGTATGCAGGAGAAGTTATTGACAGAGCCAAGCTATGTCGGAACACCGAAGGAGATAGAGATGAATATGTTTTTGATACAAGCCGTATATATGAACCATTCAAGTGGAATTATGAACCTAGCTTATTGGAAGATATAAGTTCAAAAGTATCGAGCGAAGATTATACTATACCATCGCCTCTAATTATAAGTGCCAAGAATGTTGGAAATGTGGCTAGATTTATGAATCATAGTTGCTCCCCAAATGTGTTTTGGCAGCCCATCCTATATGCAGAAAACAATCAATCCTTTATTCACATTGTGTTTTTCGCCCTTAGACATATTCCTCCGATGGCAGAGTTAACATATGATTATGGAATTGTCCCTGATGGTCATGCTAAGGGTAGTAGTGCACCCAGAGGGAGAAATAAATGCTTTTGTGGATCAGCGAAATGCCGTGGTTTCTTTGGATGA 2088 0.4167 MMEDNTVHASDSVDKSKIIEAKPLRSLAPVVPKCIQSFSSGNYPYGFPPFYSLEKPHENPIPKGAQETHVNATATEEDTPVDAKVTKESPVAAKATPIRFYKSSHDEEVNTQADGDVGLEGLNGDLDDKRKRCAKNVQNCKEFLKRNKKNRETQGDDSSSSVGISPLLKDDGDRETVTHVLMTFDSIRRRLCQLEESKELSSVLAIKRADLRASNALTCKGVRTNMRRRVGEVPGIEVGDVFFFRMEMCLVGLHGQSMGGIDYTNIKDEAQEEPVALSVVSSGVYDDDTEDNNILIYSGQGENFNKKDKHVTDQKLQRGNLALDKSSQRHNEIRVIRGLRDAMNRSAKIYMYDGLYKIQDSWIERGKSGGGVFKYKLVRLPGQPSAFAAWRLAQKWMAGSSSRNGFILADLSTGAESIPVSLVNDVDGEKGPAFFTYFQSLKKPKSFGIVQPSLGCHCNKACVPGDLNCSCIQRNGGDFPYAANSILVGRKPLIHECGPMCQCFPNCKNRVSQTGIKQHMEVFKTKNRGWGLRTLDPIRAGSFICEYAGEVIDRAKLCRNTEGDRDEYVFDTSRIYEPFKWNYEPSLLEDISSKVSSEDYTIPSPLIISAKNVGNVARFMNHSCSPNVFWQPILYAENNQSFIHIVFFALRHIPPMAELTYDYGIVPDGHAKGSSAPRGRNKCFCGSAKCRGFFG 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02448 695 ProSiteProfiles Post-SET domain profile. 679 695 IPR003616 -
Car07g02448 695 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 75 695 IPR025794 GO:0016571
Car07g02448 695 ProSiteProfiles YDG domain profile. 231 379 IPR003105 -
Car07g02448 695 ProSiteProfiles SET domain profile. 518 664 IPR001214 GO:0005515
Car07g02448 695 SUPERFAMILY SET domain 417 692 IPR046341 -
Car07g02448 695 ProSiteProfiles Pre-SET domain profile. 454 515 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Car07g02448 695 SUPERFAMILY PUA domain-like 214 400 IPR015947 -
Car07g02448 695 Pfam SET domain 529 664 IPR001214 GO:0005515
Car07g02448 695 MobiDBLite consensus disorder prediction 145 170 - -
Car07g02448 695 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH1 11 693 - -
Car07g02448 695 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 11 693 - -
Car07g02448 695 SMART preset_2 408 502 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Car07g02448 695 Gene3D - 213 397 IPR036987 -
Car07g02448 695 SMART G9a_1 226 383 IPR003105 -
Car07g02448 695 Gene3D SET domain 400 694 IPR046341 -
Car07g02448 695 Pfam Pre-SET motif 412 510 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Car07g02448 695 Pfam SAD/SRA domain 230 383 IPR003105 -
Car07g02448 695 SMART set_7 518 670 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02448 Car-Chr7 45450839 45454455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02448 5 695 Su(var)3-9 homologs AT1G73100 50.571 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Car07g02448 SAD_SRA 2.6e-47 CL0178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00185 05 4491763 4493760 Car07g02448 07 45450839 45454455 PCT