Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02440 ATGTCTTCCTTTAAGGCCTATGGTAAAGTCGATGAATACCAGCAAGCCATGTTCGAAGTTCGAAGAAAATCCCGAAAGCGAATAATAATCATAAGCTTATCCACAATTGTTCTAATTGGTATTGTATTCGCTGCGGTTTTTGGAACCGTTGCTCGTACCAACGGTCATaacaataacaacaacgacaacaaTGCGCAATCTCTTTCGAGTTCCGTGAAGGCGGTTTGTGATGTGACATTGTACCCGGATTCTTGTTATAGTAGTCTTAATCCTCTTGTTAAGTCGGGTCGGATTCGACCCGAGGACCTCTCCAAGTTGTCAATTCAAGTGGCACTAAATGAGGTTTCGAAAGGTGTCCGATATTTTTCGGAGAAGGGAGGTTTTAATGAATTGAACTTGAATGTTGATAAAAGAACAAAGGAAGCTTTGATGAATTGTAAGGATCTTTTGGGTCTTGCTGTTGATCATTTGAATGACTCTTTGGCTTATGGGGGAAAGTCTTCTTTGCTTGATGCTTTGGAGGACCTTGAAACTTGGTTGAGTGCTTCAGGTACTTACCAACAAACATGCATCGATGGCATTGAGGAGGCAGATAAAGCATTAAAATCCAGCATCACAAACAATCTAAAAGACTCTACACAACTCACAAGCAACAGTCTTGCCATCATCACATGGCTCAACAAAGCTACAACTTCAGTGAACTTTAGACGCTTATTGAGTTCATCTAATCAAAACGAAGAACCAAAATGGCTTGATCCAAAAGTGAGAAAACTACTTAAAAAAAGTGATAATATAAAACCTGACATAGTTGTGGCAAAAGATGGAAGTGGAAAATACAGCACAATTTCAGATGCATTGGAACATGTCCCTAATAAAAGTGACAAGAGGACTGTGATCTATGTGAAGAAGGGAACTTATTTGGAAAATGTTAGAGTTGAGAAGACCAAATGGAATGTCATGATCATTGGTGATGGTATGAATGTTACAATTGTGTCTGGTAGTCTTAACTTTGTGGATGGTACACCAACATTTTCATCAGCAACATTTGCTGTTTTTGGGAAGAATTTCATTGCAAGGGATATAGGCTTTAAAAACACAGCAGGTCCAGAAAAGCACCAAGCAGTTGCACTAATGACAAGTGCAGATCAAGCAGTATTCTACAGATGTTCAATGGATGCATATCAAGACACACTCTACGCTCATTCGAATCGTCAATTTTATAGAGAATGTAAAATATACGGAACAGTCGATTTCATTTTCGGAAACTCGGCTGTAGTTTTACAAAACTGCAACATTTTACCAAGAGTACCAATGCAAGGACAACAGAACACAATAACAGCACAAGGCAAATCTGATCCAAACATGAACACAGGAATTTCAATACAAAATTGCAATGTTTCACCCTTTGGAGACTTGAGTTCAGTACAAACTTACCTAGGAAGACCTTGGAAGAATTACTCAACAACTGTTTTTATGAAATGTAACTTGGATGGTTTTGTTAATCCAAACGGGTGGTTACCTTGGGTAGGAAACTCTGCACCTGATACAATATTTTATGCTGAATTTGAGAATGTTGGTAATGGTGCTTCAACAAAGAATAGGGTTAATTGGAAAGGTCTGAAAAAAATTACAAGTAAACAAGCTAAAAAGTTTACAGTTCAGGCTTTTCTTTCTGGTGATAAATGGATTCCTTCTTCTGCTGTACCTTTCAAATCTTCTTTGTAA 1725 0.3762 MSSFKAYGKVDEYQQAMFEVRRKSRKRIIIISLSTIVLIGIVFAAVFGTVARTNGHNNNNNDNNAQSLSSSVKAVCDVTLYPDSCYSSLNPLVKSGRIRPEDLSKLSIQVALNEVSKGVRYFSEKGGFNELNLNVDKRTKEALMNCKDLLGLAVDHLNDSLAYGGKSSLLDALEDLETWLSASGTYQQTCIDGIEEADKALKSSITNNLKDSTQLTSNSLAIITWLNKATTSVNFRRLLSSSNQNEEPKWLDPKVRKLLKKSDNIKPDIVVAKDGSGKYSTISDALEHVPNKSDKRTVIYVKKGTYLENVRVEKTKWNVMIIGDGMNVTIVSGSLNFVDGTPTFSSATFAVFGKNFIARDIGFKNTAGPEKHQAVALMTSADQAVFYRCSMDAYQDTLYAHSNRQFYRECKIYGTVDFIFGNSAVVLQNCNILPRVPMQGQQNTITAQGKSDPNMNTGISIQNCNVSPFGDLSSVQTYLGRPWKNYSTTVFMKCNLDGFVNPNGWLPWVGNSAPDTIFYAEFENVGNGASTKNRVNWKGLKKITSKQAKKFTVQAFLSGDKWIPSSAVPFKSSL 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02440 574 SUPERFAMILY Pectin lyase-like 266 571 IPR011050 -
Car07g02440 574 ProSitePatterns Pectinesterase signature 2. 412 421 IPR033131 -
Car07g02440 574 SMART PMEI_2 67 222 IPR006501 GO:0004857
Car07g02440 574 CDD PMEI-like_3 74 228 - -
Car07g02440 574 TIGRFAM PME_inhib: pectinesterase inhibitor domain 35 226 IPR006501 GO:0004857
Car07g02440 574 Pfam Plant invertase/pectin methylesterase inhibitor 71 222 IPR006501 GO:0004857
Car07g02440 574 Gene3D - 262 574 IPR012334 -
Car07g02440 574 Pfam Pectinesterase 268 560 IPR000070 GO:0030599|GO:0042545
Car07g02440 574 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 70 226 IPR035513 -
Car07g02440 574 PANTHER PECTINESTERASE 5 571 - -
Car07g02440 574 Gene3D Invertase/pectin methylesterase inhibitor family protein 69 228 IPR035513 -
Car07g02440 574 PANTHER PECTINESTERASE 5 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02440 Car-Chr7 45046646 45051200 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02440 7 574 Carbohydrate Esterase AT3G10710 55.070 0.0 653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00176 05 4116423 4120080 Car07g02440 07 45046646 45051200 PCT