Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02423 ATGTTCCAAGTTAAACAAGATCCTTCAATCAAGCTTTTTGGAAGTGATATTCAAATTCATATTCCCACCACAACAGATTCACAGTACTCTCTCTCTCAGATTCACTCTCTTCCACAACAACAACCCTTCATCATCATGAATGGACTTGAAGAATCAATTAATGCAGATGTTGGTGTTCCTTTGAATGAAGTTTCTAGCAAACAAGAAAATCCTCAGGAAGATGCTACTAATCCTATTCCAACCATGAACAAAACCGGTACATCGAAACTGGCGGGGAAAGCAGTTCACAGAACTAATGAACACAAAACTCCCAAAGGAGATATCGACAATCAAGAGAAAGTTTTCAAGAAGCCAGACAAGGTTCTTCCGTGTCCTCGGTGCAATAGCTCGGAGACAAAGTTTTGCTATTTCAACAATTACAATGTTAACCAACCAAGACATTTTTGCAAAAATTGTCAGAGGTATTGGACAGCTGGTGGGACAATTCGGAATGTTCCTGTTGGAGCCGGTAAGCGCAGAGGTAAGCATTCGCCTTTGCAGCACTGTCAAGTTTCTGTTACCCCCGATGCAGTACCTGTTGTCATACACACAGATCTCAACCCTGCTACTGATAAACATATTTCATCTAGCATAGTTCCTTCTGTGAACATTCCGAGTCTTGGGGAGGAAGTTCCTCTTTGTGAATCACTAGAAACTGTTTTAAATCTGAAAAGCCATAGAAAAATTGAAATGGATTCTTCTACTGTCAAAGAGGATATTGACGAGGACCCTTCTGTGATAGCCGCCGAATTCGGGGAGAAAGAGTATTCAGAAAATGGAATAGAGCATGTTGGTTTGATACAACAATGCAATGGCTTACTTCCTTTACATTCACTTCATTATTATACTGCTCCATCATGGACTTGTCAATGGAATCCATGTTGGAATGCTATGTCAACTTCTTCATATTGGGGTTGCATGCCGAATTGGGCTGGCCGCCAAATTGAAGAATATTCATTTAATGGCATTCCATCGCCTTCATCTTCAGCTAGCAGTGGCACTTTCTCGGGTAATAGGTCACCAACTTTAGGAAAACATTGTAGAGATGGAAGTACATTAACAGAAGATGACACAATGAAGAAGAATATTTGGGTGCCTAAAACTATCAGAATCAATGATCCAGAAGAGGCTGCTAAGAGTTCTATATGGTCAACTTTGACAACAAAATCTCAACAGAACAAACCTGTTATGAAAGGAAGTGTTTTTAAATCATTTGAACCTAAGTCAAATGCCAAATCCCGTAATTTAGACGATAATCAAATTCTAAGAGCAAACCCTGCTGCTTTCTGTCGCTCGGGATCTTTTCAGGAAAGCATGTAG 1359 0.4003 MFQVKQDPSIKLFGSDIQIHIPTTTDSQYSLSQIHSLPQQQPFIIMNGLEESINADVGVPLNEVSSKQENPQEDATNPIPTMNKTGTSKLAGKAVHRTNEHKTPKGDIDNQEKVFKKPDKVLPCPRCNSSETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTIRNVPVGAGKRRGKHSPLQHCQVSVTPDAVPVVIHTDLNPATDKHISSSIVPSVNIPSLGEEVPLCESLETVLNLKSHRKIEMDSSTVKEDIDEDPSVIAAEFGEKEYSENGIEHVGLIQQCNGLLPLHSLHYYTAPSWTCQWNPCWNAMSTSSYWGCMPNWAGRQIEEYSFNGIPSPSSSASSGTFSGNRSPTLGKHCRDGSTLTEDDTMKKNIWVPKTIRINDPEEAAKSSIWSTLTTKSQQNKPVMKGSVFKSFEPKSNAKSRNLDDNQILRANPAAFCRSGSFQESM 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02423 452 Pfam Dof domain, zinc finger 119 176 IPR003851 GO:0003677|GO:0006355
Car07g02423 452 MobiDBLite consensus disorder prediction 94 110 - -
Car07g02423 452 ProSitePatterns Zinc finger Dof-type signature. 124 160 IPR003851 GO:0003677|GO:0006355
Car07g02423 452 MobiDBLite consensus disorder prediction 64 88 - -
Car07g02423 452 MobiDBLite consensus disorder prediction 341 360 - -
Car07g02423 452 PANTHER CYCLIC DOF FACTOR 2 314 452 IPR045174 GO:0003700|GO:0006355
Car07g02423 452 PANTHER CYCLIC DOF FACTOR 2 10 310 IPR045174 GO:0003700|GO:0006355
Car07g02423 452 MobiDBLite consensus disorder prediction 341 365 - -
Car07g02423 452 ProSiteProfiles Zinc finger Dof-type profile. 122 176 IPR003851 GO:0003677|GO:0006355
Car07g02423 452 MobiDBLite consensus disorder prediction 64 110 - -
Car07g02423 452 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 10 310 - -
Car07g02423 452 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 314 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02423 Car-Chr7 44576669 44579878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02423 68 451 C2C2-Dof Transcription Factor Family AT5G39660 38.107 1.87e-65 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car07g02423 zf-Dof 3.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02423 - - cam:101489693 925.62