Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02416 ATGGCAAAACCATTTTCACATTCAGAACAACTACTTCTCATTCTAATCTTGTTTCTTTCCATCATCAATCTTTCACAACAGTTACAATTTTCTGAGTCTCAAACACTCCTCAAACTTCAGCAACTTCTTGGCTATCCAACATCACTAACAACCTTAAGCAGCACCATAGATTTCTGCAACATTGAACCAACACCTTATTTAACACTAGTTTGCTATGAAAACAACTTAACACAATTGCATGTTGTTGGAAACAATGATTTCACCTCTTCATTATTGCCTCAAAATTTCAACTCATACACACTATTTTCAACACTTTCCACTTTATCAAACTTAAAAGTCCTCTCTTTGGTTTCTCTTGGTTTATGGGGTCCCTTACCTCAAACCATTTCTCAATTGTCTTCACTTGAAATACTCAACATTAGCTCAAATCACTTTAGTGGAAACATTCCAATTCAACTTTCACATCTCATCAATCTTCAATCGTTAGTACTTGATGACAACAATTTCAATGGTGAAATTCCAAATTTGTTAGGCTCACTTCAAGGTTTGGTTGTTCTTAGTATGAAGAAAAACATGCTTAGTGGTAACTTGCCAAATTCATTGAATAATCTTATTACTCTTAGAGTATTGGATCTATCAAATAATCAACTAAATGGTGAATTACCTAATCTTCACAATTTGGTTAACCTTCAAGTTCTTAACTTTGAAAATAACACATTAGGACCTCATTTTCCTTCTCTTAACACAAAGTTAGTTTCACTTGTGCTTAGAAACAATAGCTTCAAGCTTGGAATTCCTTCTAATATAAGTTCATTCTATCAACTTCAAAAATTGGACCTTTCTTTGAATGGTTTTGTAGCTCCATTTCCACCATCTTTATTGTCACTACCTTCAATCAATTACCTTGATGTTTCTTCAAACAAGTTCACAGGCATGCTTTTCAAGAATTTTTCATGCAATGATGATCTAAAATTTGTGAATTTATCTTCAAATCTTTTGAAAGGTGAACTCCCTACTTGTTTGAGACCAAATAAGAAAAGGGTTGTTTTGTATGCTAGAAATTGTTTCTCAAACGAGAAACAAGATCAGCACAGATACAATTTCTGCAGCGGTGAAGCTTTGGCTGTGAATATCACACCTCATCAACAACAGAAGCATAATAAAGGAACAACAAATAAAGCAGTGCTTGCATCAAGTATGGGAATTGCTGGAATACTCATTGTTGGTGTTGTTATCTTGGTTATTAACCAAGTTCATAAGAAAAAGGTTGTGAAAACACCTTCCATATCTAAATTGGAGAGTGTTATTGTTAGTGAGATACAGAATGAAGATAAAGAGAAAACTACTACTGCAAGGTCCATAGTGGAACATATCATCAAAAAGGTTCCTGATAAAAATGCTATGAAAACATTGTCAAGATCCATAAAGGAGCATATCATGAGCCGAGTCAATAGCGGACGCCATGTGAGGACACCTTCAAGGTCCATAATAGAACATGTATCATCTGTTAACACTGCAAAGCTACTCACAGATGCAAGGTGCATATCTCAAACAATGAAGATGGGAACTGGCCTTCCTGCTTATAGGACCTTTGCTTTGGATGAACTTAAGGAAGCTACAAATAATTTTGATGCATCAAGTCTTATAAGTGAAGGTACAAATGGTCAGATATATAAAGGGGTGCTCTCTGATGGGATGCATATTACAATTAGAGGTATGAAGATAAGAAAGAAGCACAGCCCTCAGGCCTATATGCACCATGTTGAGTTGATTTCAAAACTTAGACATTCACATTTGGTTAGTGCACTTGGACATTCTTTTGAGTGCAACCAAGATGATTCAACTGTCAACACTATATTTCTCTTATTTGAGTTTGTTCCAGACACAAGTTTAAGAAGCCGCATCTCTGGATCTACAGGAGAAAAGCTTTCTTGGACACAGAGAATAGCAGCCACAATTGGAGTAGTGAAAGGCATTCAGTTTTTGCACACAGGAATTGTGCCTGGACTATATTCAAATAATCTCAAGATAACTGATATTCTTTTGGATAACAATCATAATGTTAAAATAAGCAGTTATAATGTGCCACTTTATGCTGAAAACAAAAGAATGGTCAACCATGGAACTTCTCCTGGAGTAAAAGGAAATCTCCAAGCAAGGATAAAGGATGAAGACAAGAATGATATCTATGATATTGGGGTAATCTTGCTTGAAATCATTCTTGGAAGACCAATAATGTTCCACAATGAAGTTGGAATATTAAAGGATCTATTACATGTAAGCATAAAAACAGATGATATTGCTAGAAGGAGTATTGTAGACCCAGTTGTTCATAAAGAATGCTCAGATGAATCATTAATGAAAATGATGGAGATATGTGTAAGGTGTCTATCTAGTGAGCCAAATGATAGACCTTCTGTGGAAGATATTCTTTGGAATTTGCAGTTTGCAGCACAAGTTCAGAATACATGGAAAAGAGAGACAAGTGATCATAGAGAATCACTTTCATCTTCAAGGGAGACATAA 2526 0.3519 MAKPFSHSEQLLLILILFLSIINLSQQLQFSESQTLLKLQQLLGYPTSLTTLSSTIDFCNIEPTPYLTLVCYENNLTQLHVVGNNDFTSSLLPQNFNSYTLFSTLSTLSNLKVLSLVSLGLWGPLPQTISQLSSLEILNISSNHFSGNIPIQLSHLINLQSLVLDDNNFNGEIPNLLGSLQGLVVLSMKKNMLSGNLPNSLNNLITLRVLDLSNNQLNGELPNLHNLVNLQVLNFENNTLGPHFPSLNTKLVSLVLRNNSFKLGIPSNISSFYQLQKLDLSLNGFVAPFPPSLLSLPSINYLDVSSNKFTGMLFKNFSCNDDLKFVNLSSNLLKGELPTCLRPNKKRVVLYARNCFSNEKQDQHRYNFCSGEALAVNITPHQQQKHNKGTTNKAVLASSMGIAGILIVGVVILVINQVHKKKVVKTPSISKLESVIVSEIQNEDKEKTTTARSIVEHIIKKVPDKNAMKTLSRSIKEHIMSRVNSGRHVRTPSRSIIEHVSSVNTAKLLTDARCISQTMKMGTGLPAYRTFALDELKEATNNFDASSLISEGTNGQIYKGVLSDGMHITIRGMKIRKKHSPQAYMHHVELISKLRHSHLVSALGHSFECNQDDSTVNTIFLLFEFVPDTSLRSRISGSTGEKLSWTQRIAATIGVVKGIQFLHTGIVPGLYSNNLKITDILLDNNHNVKISSYNVPLYAENKRMVNHGTSPGVKGNLQARIKDEDKNDIYDIGVILLEIILGRPIMFHNEVGILKDLLHVSIKTDDIARRSIVDPVVHKECSDESLMKMMEICVRCLSSEPNDRPSVEDILWNLQFAAQVQNTWKRETSDHRESLSSSRET 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02416 841 SMART serkin_6 543 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02416 841 Gene3D Transferase(Phosphotransferase) domain 1 627 840 - -
Car07g02416 841 ProSiteProfiles Leucine-rich repeat profile. 206 228 IPR001611 GO:0005515
Car07g02416 841 Gene3D Phosphorylase Kinase; domain 1 504 616 - -
Car07g02416 841 Pfam Protein kinase domain 547 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02416 841 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 11 418 - -
Car07g02416 841 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 482 829 - -
Car07g02416 841 SUPERFAMILY Protein kinase-like (PK-like) 523 816 IPR011009 -
Car07g02416 841 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 11 418 - -
Car07g02416 841 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 482 829 - -
Car07g02416 841 Gene3D Ribonuclease Inhibitor 249 371 IPR032675 -
Car07g02416 841 ProSiteProfiles Protein kinase domain profile. 543 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02416 841 Gene3D Ribonuclease Inhibitor 29 248 IPR032675 -
Car07g02416 841 SUPERFAMILY L domain-like 66 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02416 Car-Chr7 44397750 44405419 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02416 479 824 Miscellaneous Gene Families AT3G03770 58.571 5.50e-134 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Car07g02416 Pkinase 2.2e-15 CL0016