Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02415 ATGGCTTGTTTTCAATTTCAATTGCTCGCTTCTCATTCTACTCAACTTTGCGTCTCTCCATTCTCCAACATTTCTTCTTGTTACACACACAATTTTCCAACTGGCACTTCCCGTCAAAATATCTCCAACACCGTTTCTTTTTATTCACTCACAAAACCAACTTCTTCTCCATCATTCCTTGTAAAAGCTTCTTCTAACAACACGCTTCCCCCTTACAACGTTTTGATTACTGGCTCTACCAAAGGGATAGGGTATGCTTTGGCAAAAGAGTTTCTAAAAGCGGGAGACAACGTCTTAGTTTGCTCAAGATCAGATAAAAGGGTAGAGACTGCTGTTCAGACCTTTAGGGAAGAGTTTGGGGAGCAGCATGTGTGGGGCACTACATGTGATGTGAGAAATGGAGAAGATGTGAAGAAATTAGTTTCGTTTGCTCAAGAAAAGCTGAAATACATCGATATATGGATCAATAATGCTGGATCGAATGCTTATAGCTACAAGCCACTTGCTGAAGCATCAGATGAGGATCTTATCGAGGTGGTTACGACAAACACACTTGGCTTGATGATATGCTGTCGAGAGGCAATAAAGATGATGGTGAGCCAACCTCGGGGAGGTCATATTTTCAATATTGATGGAGCAGGTTCAGATGGAAGACCAACTCCCAGGTTTGCTGCATATGGAGCAACAAAGAGAAGTGTGGTGCATTTAACAAAGTCATTACAGGCAGAATTGCAGATGCAAGATGTTAAAAATGTGATGGTTCACAATCTTTCGCCAGGAATGGTTACAACAGATCTGCTCATGTCTGGTGCCAATACAAAGCAGGCAAAATTTTTCATTAATGTCTTGGCCGAGCCAGCCGAAGTGGTAAGATGTTCATAG 882 0.4184 MACFQFQLLASHSTQLCVSPFSNISSCYTHNFPTGTSRQNISNTVSFYSLTKPTSSPSFLVKASSNNTLPPYNVLITGSTKGIGYALAKEFLKAGDNVLVCSRSDKRVETAVQTFREEFGEQHVWGTTCDVRNGEDVKKLVSFAQEKLKYIDIWINNAGSNAYSYKPLAEASDEDLIEVVTTNTLGLMICCREAIKMMVSQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVMVHNLSPGMVTTDLLMSGANTKQAKFFINVLAEPAEVVRCS 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02415 293 Pfam short chain dehydrogenase 74 269 IPR002347 -
Car07g02415 293 CDD SDR_c 74 291 - -
Car07g02415 293 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 213 241 IPR020904 GO:0016491
Car07g02415 293 PRINTS Glucose/ribitol dehydrogenase family signature 226 245 IPR002347 -
Car07g02415 293 PRINTS Glucose/ribitol dehydrogenase family signature 250 267 IPR002347 -
Car07g02415 293 PRINTS Glucose/ribitol dehydrogenase family signature 149 160 IPR002347 -
Car07g02415 293 PRINTS Glucose/ribitol dehydrogenase family signature 199 215 IPR002347 -
Car07g02415 293 PRINTS Glucose/ribitol dehydrogenase family signature 73 90 IPR002347 -
Car07g02415 293 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN-RELATED 34 290 - -
Car07g02415 293 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 72 291 IPR036291 -
Car07g02415 293 Gene3D - 62 292 - -
Car07g02415 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 205 213 IPR002347 -
Car07g02415 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 160 IPR002347 -
Car07g02415 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 226 245 IPR002347 -
Car07g02415 293 PANTHER CHLOROPHYLL(IDE) B REDUCTASE NOL, CHLOROPLASTIC 34 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02415 Car-Chr7 44388217 44394138 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02415 37 266 Acyl Lipid Metabolism Gene Families AT1G24360 30.638 2.01e-18 82.0