Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02373 ATGACACAACCATCGGTtccatctcctcctccgcctctaccaccacctccaccgtcgacagctccaccaccGTCGCAGCCTTCCGAAGGCGTCCGCGTTCGCTGTGCCGGTTGCCGTATGATTCTGACCGTAGCGCCCGGACTGACCGAATTCGCTTGCCCGACCTGTCGAATGCCGCAGATGCTTCCGCCAGAACTCATGGCTAGGGTCCACCAAACGGCACCGTCAATTTCGCCGTTAACTCCGCCCTCGCAGAATTTGCCGGCGCACGGCATTGATCCTACTAAGATCCAGCTTCCTTGCGCTTCCTGTAAGGCTATTCTCAATGTTCCTCATGGCCTCTCGCGGTTCTCTTGTCCTCAATGTAAAGTTGACCTCGCTGTTGATCTCTCTAAGGTTAAACAGTTTCTCCCTCCGCCTCCGCTTGAAGAAGTTAACGAGGTTGCTGTTGAAGTGGAGCGGGATGAAGATGAAGGGGGCATGGTTGGAGAAACATTTACTGATTATAGACCACCAAAAGTATCTATTGGACCTCCACACCCAGATCCTGTTGTGGAGACATCTTCCTTGGCTGCAGTGCAGCCACCTGAACCTACCTATGATCCAAAAACTAAAGATAATTTGGAAAGTTCAAAGGCTTTGTCATGCTTGCAAATTGAGACCGTGGTCTATGCTTGTCAGAGACACCTTCAACACCTCCCCAGTGGAGTTAGGGCAGGATTCTTTATTGGAGATGGAGCTGGTGTAGGTAAAGGTCGAACAATTGCAGGTCTAATTTGGGAGAACTGGCACCATGGAAGGAGAAAAGCATTGTGGATTTCTGTTGGTTCAGACTTGAAGTTTGATGCTAGAAGAGACTTGGATGATGCAGGTGCAACATGTATTGAAGTGCATGCTTTGAACAAACTGCCTTATTCTAAGCTTGACTCAAAGTCTGTTGGGATCAGGGAGGGAGTTGTTTTCTTGACATACAATAGCCTAATAGCATCTTCCGAGAAAGGTCGTTCTCGTCTTCAGCAACTTGTGCAGTGGTGTGAACCAGGGTTTGATGGCCTTGTAATTTTTGATGAGTGTCACAAAGCAAAAAATTTAGTCCCTGAATCTGGTAGTCAGCCAACACGAACTGGAGAAGCAGTGCTTGAAATTCAGGATCGATTACCTGAAGCTCGTGTCGTTTATTGCTCAGCAACTGGTGCATCTGAACCCCGCAATATGGGCTATATGGTTAGACTTGGTCTTTGGGGAGAAGGAACTTCTTTCTCTGAGTTCCGTGAATTTCTTGGTGCTCTTGATAGAGGGGGTGTTGGAGCTCTAGAATTAGTTGCCATGGACATGAAAGCAAGGGGTATGTATTTATGTCGGACACTTAGCTACGAGGGTGCTGAGTTTGAAGTTATTGAAGCACCATTGGAAGATAAAATGATGGACATGTATAAAAAGGCAGCAGAATTTTGGGCAGAATTACGAGTTGAATTGCTGTCAGCTAGTGCCTTCCTAAATGATAAACCTAACACTAGTCAACTATGGCGATTATACTGGGCAAGTCACCAGCGTTTCTTTAGACACTTGTGTATGTCTGCTAAAGTCCCTGCTACTGTAAGACTTGCAAAACAAGCATTAGTTGATGAAAAGAGTGTAGTCATTGGTCTTCAGAGTACTGGTGAAGCAAGGACAGAGGAAGCTGTGACAAAATATGGTTCTGAACTAGATGACTTTGTTTCTGGACCTCGAGAATTGCTACTTAAATTTGTGGAAGAAAATTATCCATTACCAGAAAAACCTGAACTCCTTCCAGGAGAAGATGGTGTTAAGGAGCTTCAAAGGAAGAGGCACTCCGCAACTCCTGGTGTTTCATTAAAAGGAAGAGTCAGAAAAGTAGCCAAGTGGCAACCTCCTAGTGATGCAGAAAGTGATGAAGAATCTCAAACTGATTCTGGCATTGAATCTAATGACTCTGACGAGGAGTTTCAGATATGTGAAATTTGTACTACTGAGGAGGAAAGGAAAAAATTGTTGCAGTGTTCCTGCTGTGGTAAATTAGTCCATGCCACATGCTTGATGCCACCAATTGGTGATATAGTTCCTGAAGAGTGGTCATGCCATTTGTGTAAGGAGAAAACAGATGAATATCTTCAAGCAAGGCAGGCCTACATAGCTGAACTCCAGAAGAGGTATGATGCAGCCTTGGAACGTAAGACAAAAATATCAGAGATTATTCGTTCTTTGGATCTTCCAAATAATCCTTTGGATGATATTACTGACCAGCTAGGTGGCCCCGACAAAGTTGCAGAAATCACAGGAAGGAGAGGCATGCTTGTGAGGGGCCCTACTGGAAAGGGTGTAACTTATCAGGCTCGTAATACAAAGGATGTCACGATGGAAATGGTTAACATGCACGAAAAGCAGCTTTTTATGGACGGTAAAAAGTTAGTTGCTATTATCTCTGAAGCTGGATCAGCTGGTGTTTCTTTGCAGGCAGATAGGAGAGCTGCAAATCAGAAAAGAAGGGTTCATTTAACTCTAGAGCTTCCATGGAGTGCTGACCGAGCAATTCAGCAATTTGGAAGAACTCATCGATCAAATCAAGCTTCAGCACCAGAATACAGGATACTCTTTACTAATCTTGGTGGAGAACGAAGGTTTGCATCAATTGTTGCGAAGAGATTAGAATCTCTTGGTGCTTTGACTCAGGGGGACCGCAGGGCTGGACCATCATTAAGTGCTTATAATTACGATAGTGCTTATGGAAAGAGGGCTCTGGTGATTATGTACAAAGGAATAATGGAGCAGGATTCTCTACCTGTTGTACCCCCGGGATGTTCATCTGACAAACCAGATACCATTCAAGATTTCATTATGCAGGCAAAAGCGGCTCTTGTATCTGTTGGGATTGTTAGGGACACAATTCTTGGAAATGGTAAAGACCTTGGAAGGTTATCTGGTCGCATTATTGATTCAGATATGCACGAAGTTGGGCGATTCCTCAACCGGCTTTTGGGACTACCTCCTGATATTCAAAATGGGCTATTTGAGTTATTTGTGAGTATCTTGGATCTTCTTGTTCGGAATGCTCGGATTGAAGGTAACCTTGATACCGGCATTGTGGACATGAAAGCTAATGTCATTGAACTACAGGGGACTCCAAAGACAGTTCATGTTGATCAACTGACTGGGGCTTCAACCGTTCTGTTTACATTCATCTTGGATCGTGGGATCACATGGGAGTTGGCAAGTAGCATGCTGAATGAAAAGCAGAAGGATGGGCTTGGCTCAGCCAATGATGGCTTCTATGAGTCCAAGAGGGAGTGGTTGGGAAAACGTCATATCATTTTAGCTTTTGAAAGTTCCGCTTCGGGTATGTATAAAATAGTTCGTCCTCCAGTTGGAGAATCAAACCGGGAGATGCCTCTATCTGAATTAAAAAGTAAATACAGGAAAGTTTTATCCTTAGAAAAGGCTCAGACTGGTTGGGAAGAGGAATATGAAGTTTCATCTAAACAGTGCATGCATGGTCCCAAGTGTAAGATTGGTACCTTCTGTACAGTGGGCAGAAGACTACAGGAAGTAAATGTCTTGGGTGGCCTAATTCTTCCGGTTTGGGGAACAATAGAAAAGGCTCTTTCTAAGCAG 3630 0.4372 MTQPSVPSPPPPLPPPPPSTAPPPSQPSEGVRVRCAGCRMILTVAPGLTEFACPTCRMPQMLPPELMARVHQTAPSISPLTPPSQNLPAHGIDPTKIQLPCASCKAILNVPHGLSRFSCPQCKVDLAVDLSKVKQFLPPPPLEEVNEVAVEVERDEDEGGMVGETFTDYRPPKVSIGPPHPDPVVETSSLAAVQPPEPTYDPKTKDNLESSKALSCLQIETVVYACQRHLQHLPSGVRAGFFIGDGAGVGKGRTIAGLIWENWHHGRRKALWISVGSDLKFDARRDLDDAGATCIEVHALNKLPYSKLDSKSVGIREGVVFLTYNSLIASSEKGRSRLQQLVQWCEPGFDGLVIFDECHKAKNLVPESGSQPTRTGEAVLEIQDRLPEARVVYCSATGASEPRNMGYMVRLGLWGEGTSFSEFREFLGALDRGGVGALELVAMDMKARGMYLCRTLSYEGAEFEVIEAPLEDKMMDMYKKAAEFWAELRVELLSASAFLNDKPNTSQLWRLYWASHQRFFRHLCMSAKVPATVRLAKQALVDEKSVVIGLQSTGEARTEEAVTKYGSELDDFVSGPRELLLKFVEENYPLPEKPELLPGEDGVKELQRKRHSATPGVSLKGRVRKVAKWQPPSDAESDEESQTDSGIESNDSDEEFQICEICTTEEERKKLLQCSCCGKLVHATCLMPPIGDIVPEEWSCHLCKEKTDEYLQARQAYIAELQKRYDAALERKTKISEIIRSLDLPNNPLDDITDQLGGPDKVAEITGRRGMLVRGPTGKGVTYQARNTKDVTMEMVNMHEKQLFMDGKKLVAIISEAGSAGVSLQADRRAANQKRRVHLTLELPWSADRAIQQFGRTHRSNQASAPEYRILFTNLGGERRFASIVAKRLESLGALTQGDRRAGPSLSAYNYDSAYGKRALVIMYKGIMEQDSLPVVPPGCSSDKPDTIQDFIMQAKAALVSVGIVRDTILGNGKDLGRLSGRIIDSDMHEVGRFLNRLLGLPPDIQNGLFELFVSILDLLVRNARIEGNLDTGIVDMKANVIELQGTPKTVHVDQLTGASTVLFTFILDRGITWELASSMLNEKQKDGLGSANDGFYESKREWLGKRHIILAFESSASGMYKIVRPPVGESNREMPLSELKSKYRKVLSLEKAQTGWEEEYEVSSKQCMHGPKCKIGTFCTVGRRLQEVNVLGGLILPVWGTIEKALSKQ 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02373 1210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 422 IPR027417 -
Car07g02373 1210 MobiDBLite consensus disorder prediction 637 652 - -
Car07g02373 1210 MobiDBLite consensus disorder prediction 1 25 - -
Car07g02373 1210 ProSiteProfiles Zinc finger PHD-type profile. 656 706 IPR019787 -
Car07g02373 1210 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 642 728 IPR013083 -
Car07g02373 1210 PANTHER OS08G0223700 PROTEIN 29 1210 - -
Car07g02373 1210 Pfam C-terminal domain on Strawberry notch homologue 747 1036 IPR026937 -
Car07g02373 1210 MobiDBLite consensus disorder prediction 161 181 - -
Car07g02373 1210 PANTHER STRAWBERRY NOTCH-RELATED 29 1210 IPR026741 GO:0006355
Car07g02373 1210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 802 907 IPR027417 -
Car07g02373 1210 SUPERFAMILY FYVE/PHD zinc finger 648 709 IPR011011 -
Car07g02373 1210 MobiDBLite consensus disorder prediction 623 652 - -
Car07g02373 1210 Pfam P-loop containing NTP hydrolase pore-1 179 479 IPR039187 -
Car07g02373 1210 SMART PHD_3 658 704 IPR001965 -
Car07g02373 1210 ProSitePatterns Zinc finger PHD-type signature. 659 703 IPR019786 -
Car07g02373 1210 Coils Coil 718 738 - -
Car07g02373 1210 MobiDBLite consensus disorder prediction 1 29 - -
Car07g02373 1210 Gene3D - 205 409 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02373 Car-Chr7 42395076 42420584 Wgd