Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02337 ATGGATCTCATAATTACACATACCCCGAACCCATTTCTTCTTTCCTCATCACTACTAACCCCAACTCTTCAAAATTCCAACTTTTTCACGTTAACCGCACCGCTCAGTAACCGCATAAAGCTCAAGCTTCGAGCTTCATCTACGTCAGACTCAAATGGCGCTGACGGGTCTTCTTGGTCACAGTCATTGGAACGCGCGTCGAGGCGGTTCTTGCTGAAATTCGGAGATACGGTGAAGAAGGAGACGGGTGTTGATTTAGGAGATGGTGTTGTGAAGGCAAGTGAGTTTGTGGATGGTGTGAAAAACGTTGGGAGTGAGTTTGGAACTCGTTCGCTGTCCGAGTTTGTTGATTGGAATCGTGTTGAACATTGGAAGAATATCAAGAACTGGGAACCTAGGCGAATCGGTGCTTTAGTTTTGTATATATTTGTTGTGGCATTTGCTTGTAGAGGATCATACGTAGCAATTAAAGCACCTTTCGTAAATCGCCAGAGGAAAGAGTTGACTGAAGCCTACATGGAAGCGTTAATTCCTGAGCCGACCCCGACTAACATCAGAAGATTTAAGAAGGGTATGTGGAGGAAGACAATGCCAAAAGGCCTGAAAATGAAAAAGCTTATTGAAAGACCTGATGGAACACTTGTTCATGATACCACTTATGTTGGAGAAGATGCATGGGAGGATGATCAAGAATCTTCAGAGGAACATGTAAAACAAATTGTAGATGACGAGGAAAGGTTAAACAGTGAAGAGAAGAACGAAATAACCAAAGACCTGGGCATTTCAGCAGGCGAAGTTCAAACTGAGGGCACATGGCGTGAGAGACTTCATAAATGGAGGGAAATCCTTGGAAAAGAACGTATTGTTGAGCAATTAAATTCCTCACATGCCAAATATATTGTTGAGTTTGATATGAAAGAGGTTGAAAATAGTCTTCGCAAGGATGTGGCAGAAAAGGCGACAGCCACTCAAGGAACAAGGAGTCTGTGGATAGCTAAGAGATGGTGGCGCTATCGTCCTAAACTTCCTTACAATTATTTTCTTGACAAACTTGATAGTTCCGAGGTAGCAGCTATTGTTTTTACGGAAGACTTGAAAAGATTATATGTGACAATGAAAGAAGGTTTCCCATTGGAGTATGTTGTTGATATCCCTCTTGATCCTTATCTTTTTGAGATTATTACAAGTTCTGGAGTGGAAGTAGATCTCCTTCAGAAGCAACAGATCCATTATTTTTTGAAGGTTGCAATTGCATTTTTACCAGGAATACTAATTCTATGGCTTTTAAGGGAGTCTATGACCATTCTGAACATCACTTCCAATCGTTTTCTTTACAAGAAGTATAATCAACTCTTTGATATGGCCTATGCAGAAAATTTCATTTTGCCAGTCAGAGATGTTGGTGAAACAAAATCTATGTCCAAGGAAGTTGTGTTGGGAGGTGATGTTTGGGATCTGCTTGATGAGTTGATGATCTACATGAGAAATCCTATGCAGTTCTATGAAAGGGATGTGCAGTTTGTTCGGGGTGTTCTACTCTCTGGACCTCCAGGAACAGGAAAAACACTTTTTGCAAGGACACTTGCAAAACAAAGTGGATTGCCCTTTGTTTTTGCTTCTGGTGCTGAGTTCACAGATAGTGAAAAAAGTGGAGCAGCTAGGATTAATGAGATGTTTTCCCTTGCTAGGAGAAATGCACCTTGTTTTGTATTTGTGGATGAAATAGATGCCATTGCTGGAAGGCATACTAGGAAGGATCCACGTAGAAGGGCAACTTTTGAGGCTCTTCTTTCACAGCTTGATGGAGAGAAGGAGAAAACTGGTGTTGACCGTCTGTCCCTCAGACAAGCGGTCATATTTATATGTGCCACAAATAGGCCAGATGAACTAGATCTTGAATTTGTTCGACCTGGAAGAATTAATCGTCGGCTATACATTGGTTTGCCTGATGCAGAACAAAGAGTCAAAATTTTTGGTGTGCATAGTTCTGGAAAGCAACTTGCAGAGGATGTGGATTTCACAAAGCTTGTCTTCCGTACTGTTGGATTATCTGGAGCAGATATAAGAAACCTGGTCAACGAAGCAGCAATAATGTCGGTTCGAAAAGGGCATTCCAAAATTTTCCAGAAAGACATTGTTGATGTTTTAGATAAACAGCTGCTTGAGGGAATGGGTGTTCTTATCACTGAGGATGAGCAAAAGAAGTGTGAAGAAAGAGTATCTTTGGAAAAAAAGAGACTGCTTGCTGTTCATGAAGCCGGCCATATTGTGCTTGCTCACTTATTTCCTCGGTTTGACTGGCATGCATTTTCACAGCTCCTGCCCGGTGGTAAGGAAACTGCAATATCTGTTTTCTACCCTCGAGAAGATATGGTAGACCAAGGTTATACAACTTTTGGTTACTTAAAGATGCAAATGGTAGTGGCACATGGTGGTCGATGTGCTGAACGTGTTGTATTTGGTGATGATATTACTGATGGAGGAAGGGATGATCTAGAAAAGATAACAAAGATTGCTAGGGAGATGGTAATCAGCCCTCAAAATTCAAGGTTGGGGTTAATAGCTTTAACAGAACGGGTTGGCTTAGCTGAACGACCAGACGTTTCAGATGACGATTTGATAAGATATAGATGGGATGATCCTCAAGTAATTCCTTCTAAGATGTCAGTAGAGTTATCTGAGCTCTTTACACGGGAGTTGACAAGGTACATTGAAGAAACTGAAGAACTTGCGATGAATGCTTTGAGGGATAATAAGCACATCCTGGATTTGGTTGCAAGGGAACTATTGGAGAAGTCAAGAATAACTGGTTTGGAGGTTGAAGAAAAAGTGAAAAGACTGTCTCCGGTAATGTTTGAAGACTTTGTGAAGCCATTCCAAGTAAACGTTGAAGAGGAGGGACCATTGAAGCATAATGATCGTGTACGGTATCGGGCACCTGACTTATATGCGGCTCCTCTCCATAGATGTTAA 2973 0.4151 MDLIITHTPNPFLLSSSLLTPTLQNSNFFTLTAPLSNRIKLKLRASSTSDSNGADGSSWSQSLERASRRFLLKFGDTVKKETGVDLGDGVVKASEFVDGVKNVGSEFGTRSLSEFVDWNRVEHWKNIKNWEPRRIGALVLYIFVVAFACRGSYVAIKAPFVNRQRKELTEAYMEALIPEPTPTNIRRFKKGMWRKTMPKGLKMKKLIERPDGTLVHDTTYVGEDAWEDDQESSEEHVKQIVDDEERLNSEEKNEITKDLGISAGEVQTEGTWRERLHKWREILGKERIVEQLNSSHAKYIVEFDMKEVENSLRKDVAEKATATQGTRSLWIAKRWWRYRPKLPYNYFLDKLDSSEVAAIVFTEDLKRLYVTMKEGFPLEYVVDIPLDPYLFEIITSSGVEVDLLQKQQIHYFLKVAIAFLPGILILWLLRESMTILNITSNRFLYKKYNQLFDMAYAENFILPVRDVGETKSMSKEVVLGGDVWDLLDELMIYMRNPMQFYERDVQFVRGVLLSGPPGTGKTLFARTLAKQSGLPFVFASGAEFTDSEKSGAARINEMFSLARRNAPCFVFVDEIDAIAGRHTRKDPRRRATFEALLSQLDGEKEKTGVDRLSLRQAVIFICATNRPDELDLEFVRPGRINRRLYIGLPDAEQRVKIFGVHSSGKQLAEDVDFTKLVFRTVGLSGADIRNLVNEAAIMSVRKGHSKIFQKDIVDVLDKQLLEGMGVLITEDEQKKCEERVSLEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDMVDQGYTTFGYLKMQMVVAHGGRCAERVVFGDDITDGGRDDLEKITKIAREMVISPQNSRLGLIALTERVGLAERPDVSDDDLIRYRWDDPQVIPSKMSVELSELFTRELTRYIEETEELAMNALRDNKHILDLVARELLEKSRITGLEVEEKVKRLSPVMFEDFVKPFQVNVEEEGPLKHNDRVRYRAPDLYAAPLHRC 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02337 990 Gene3D - 468 649 IPR027417 -
Car07g02337 990 CDD AAA 509 648 - -
Car07g02337 990 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 12, CHLOROPLASTIC 36 990 - -
Car07g02337 990 SUPERFAMILY FtsH protease domain-like 743 953 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Car07g02337 990 Pfam ATPase family associated with various cellular activities (AAA) 511 647 IPR003959 GO:0005524|GO:0016887
Car07g02337 990 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 475 718 IPR027417 -
Car07g02337 990 Gene3D - 650 721 - -
Car07g02337 990 PANTHER ATP-DEPENDENT PROTEASE 36 990 - -
Car07g02337 990 Pfam AAA+ lid domain 670 711 IPR041569 -
Car07g02337 990 Pfam Peptidase family M41 740 941 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Car07g02337 990 SMART AAA_5 507 650 IPR003593 -
Car07g02337 990 Gene3D Peptidase M41 733 948 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02337 Car-Chr7 40612688 40626761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02337 475 947 Miscellaneous Gene Families AT5G53170 29.569 1.33e-53 199