Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02332 ATGGAAGAAGACTTAAACATGTGGCTTTCTTTCTACATGGATGAAAGTATCAACCATGATTTCCCTATCAGAAGGTTTTGTCCTGCAAGAATGGATCAAGATCAAGAAGGAGAGTTCCATGACCAAGAAACAGTACTTGATGAAATTGAATTGTGTACTTCAGAGATTGATGACTTTGTTGATAGTTTCATTAACATGGATCCATATGAAGATCAAGAAGAGTCTCTAGAGGAGAAGAAACATCAAAGTTTTGATCACTTTATAGTGAatgaagataatgatgatggtgatgcatattccatgatggtgataaatgatgTCATTGGATATGTTCCAACCATTATGGAGGATGAAGAATTAGAGATCTGTGAAAACACCACAATCAATATGGAAAGCAAAGATGAAGAGCAAGCCATCAGACTCGGTATGAACCAAGGATTAGACTTGGTTCATACGCTGTTGGCTTGTGCCGAGGCCGTGGGATGCAGAGACACACATCAAGCAAATTTGTTACTTAACAAAATTTGGTCTTTGGCAAATCCCTCGGGAGATTCATTGCAAAGAGTTTCTTACTGTTTTGCCAAAGGATTGAAGTGTAGGTTATCACTTTATCCACATAATAATGTGCTTTCAAATGGTACAACAATCACAAAAAGTGCTTCTTCTAATGATGTTTCTTTAATCACTTGGGAGAAAAAGTTGGAAGCTTTTAAGCTTCTTTACCAAACAACACCTTACATTGCTTTTGGTTACATGGCTGCAAATGAAGCTATATGTCAAGCATCAAAAATAAAAAGTTCTATTCACATAATTGATTTACGAATGGAACATACTTTTCAATGGCCTTCCCTTATAAGGAACCTTGCTTCAAGGCCTGAAGGGCCTCCAAAGCTAAGGATCACAGGATTCAATACCAATGAAGACAACACAAAAAAACTTCAAACTAGCATGAGTTTCCTTGTGGAAGAAGCAAGCTCATTTGGAATAGTCCTTGAATTTTGTATAATATCAGAGGCTGCAACTCCTTCTCTTCTTACAATTGAGAACCTTAAGTTGAGAAAAGGTGAATCTTTAGTTTTTAATAGCATCTTGCAATTGCACAAATATGTCAAAGAGAGTAGAGGCTATCTAAAGGAAATTCTCCAATCAATCAAGAAACTAAGTCCAATTACACTCACAGTTGTAGAACAAGATACAAACCATAATGGACCTTTTTTTCTTGGTAGGTTTTTGGAATCACTTCACTATTACTCAGCAATATTTGATTCACTTGAGGCAACTATGGTAAGGAATAGTGCACAAAGGATGAAAATTGAGAGAGTACACTTTGCTGACGAAATTTGTAATGTTGTGGCTTATGAGGGACCTGATAGAATAGAGAGACATGAAAGAGTCGAACAATGGAGGAGACAATTAGGGAGAGGAGGATTTCAGGTAATGCCACTCAAGTGTACGAGTCAAGCTAGAATGATGCTTTCTGTTTATGATTGTGATGGATATACATTGTCATGTGAAAAGGGTTGTCTTTTACTTGGTTGGAAAGGAAGGTCAATCATTATGGCTTCTGCATGGCAAGTGTCAAGTTTGGAAAAGGGAGTAGAATGA 1605 0.3595 MEEDLNMWLSFYMDESINHDFPIRRFCPARMDQDQEGEFHDQETVLDEIELCTSEIDDFVDSFINMDPYEDQEESLEEKKHQSFDHFIVNEDNDDGDAYSMMVINDVIGYVPTIMEDEELEICENTTINMESKDEEQAIRLGMNQGLDLVHTLLACAEAVGCRDTHQANLLLNKIWSLANPSGDSLQRVSYCFAKGLKCRLSLYPHNNVLSNGTTITKSASSNDVSLITWEKKLEAFKLLYQTTPYIAFGYMAANEAICQASKIKSSIHIIDLRMEHTFQWPSLIRNLASRPEGPPKLRITGFNTNEDNTKKLQTSMSFLVEEASSFGIVLEFCIISEAATPSLLTIENLKLRKGESLVFNSILQLHKYVKESRGYLKEILQSIKKLSPITLTVVEQDTNHNGPFFLGRFLESLHYYSAIFDSLEATMVRNSAQRMKIERVHFADEICNVVAYEGPDRIERHERVEQWRRQLGRGGFQVMPLKCTSQARMMLSVYDCDGYTLSCEKGCLLLGWKGRSIIMASAWQVSSLEKGVE 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02332 534 Pfam GRAS domain family 149 525 IPR005202 -
Car07g02332 534 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 528 IPR005202 -
Car07g02332 534 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 4 528 - -
Car07g02332 534 ProSiteProfiles GRAS family profile. 140 525 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02332 Car-Chr7 40361145 40362787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02332 146 530 GRAS Transcription Factor Family AT1G66350 37.436 7.73e-80 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car07g02332 GRAS 6.4e-108 CL0063