Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02304 ATGACTTGTTTTCCTTTCTTATTTGGTAAGAAAGTGTCGTCTGATGTAAGACGAGATCCTGAAATTGATGAAGGACTTTCTGGCATTCGAATAAAAGTCTATACTTACAAACAACTAAAAATTGCCTCTGACAATTTCAGTCCGGCTAATAAAATCGGGGAGGGTGGTTTTGGTTCTGTCTTTAAGGGAGTGCTAAAAGATGGGAAGGTAGCCGCTATAAAAGTTCTTTCAACGGAATCAAAACAAGGGGTGAAGGAATTCTTGACAGAGATTAATGTGATTTCAGAAATACAGCATGAAAATTTGGTTATACTCTATGGTTGTTGTGTGGAAGGAGATCACCGAATATTAGTCTACAATTACCTTGAGAACAATAGCCTTGCACAAACCCTTCTAGCTGGAGGTCACAGTAATCTCTACTTTGATTGGCAAACACGATGTAGGATATGCATTGGAGTTGCACGTGGACTTGCCTTTCTCCACGAGGAAGTACAACCACATATTGTTCACAGGGATATAAAAGCAAGCAATATTCTCCTTGACAAAGACCTTACACCTAAGATTTCAGATTTTGGTCTTGCAAAACTTATTCCATCATACATGTCTCATGTCAGCACACGCGTAGCAGGAACAATAGGTTATTTGGCACCAGAGTATGCAATAAGGGGGCAGTTGACACGTAAAGCAGACATTTACAGTTTCGGGGTCCTTCTTGTGGAAATAGTCAGTGGGAGAACTAACACAAATACAAGATTACCAATGGGAGATCAATACATTCTAGAAAGGACATGGGAACTGTATGAGCGAAAGGAATTGGTACAGTTGGTAGACATATCACTAAATGGAGGATTCAATGCCGAGGAGGCTTGTAAATATTTAAAGATTGCTCTTCTTTGCACTCAGGATACTCCTAAGCACCGCCCAACCATGTCTTCTGTGGTCAAAATGCTCACTGCAGAAATGGATGTTAATGAAAGTAAGATAACAAAACCAGGCTTGATTTCAGATGTTATGGACTTGAAAATTAGAGAACCTAAAAAAAAAATAGGCTTGGAGACTTTTCCATCTTCATACAATGCTTCCTCTAGTTCAGATAGCCAGGGTACTACTATATCATTGGCTGCTTCCAGTGCTGCAACAACTTCAACCTTCACTTTAAAACATGATCAAAGCATGTAA 1179 0.3944 MTCFPFLFGKKVSSDVRRDPEIDEGLSGIRIKVYTYKQLKIASDNFSPANKIGEGGFGSVFKGVLKDGKVAAIKVLSTESKQGVKEFLTEINVISEIQHENLVILYGCCVEGDHRILVYNYLENNSLAQTLLAGGHSNLYFDWQTRCRICIGVARGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLIPSYMSHVSTRVAGTIGYLAPEYAIRGQLTRKADIYSFGVLLVEIVSGRTNTNTRLPMGDQYILERTWELYERKELVQLVDISLNGGFNAEEACKYLKIALLCTQDTPKHRPTMSSVVKMLTAEMDVNESKITKPGLISDVMDLKIREPKKKIGLETFPSSYNASSSSDSQGTTISLAASSAATTSTFTLKHDQSM 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02304 392 SUPERFAMILY Protein kinase-like (PK-like) 28 317 IPR011009 -
Car07g02304 392 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Car07g02304 392 SMART serkin_6 46 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02304 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Car07g02304 392 PANTHER - 2 373 - -
Car07g02304 392 Gene3D Transferase(Phosphotransferase) domain 1 122 331 - -
Car07g02304 392 Pfam Protein kinase domain 49 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02304 392 CDD STKc_IRAK 52 318 - -
Car07g02304 392 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 373 - -
Car07g02304 392 ProSiteProfiles Protein kinase domain profile. 46 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02304 392 Gene3D Phosphorylase Kinase; domain 1 17 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02304 Car-Chr7 36527071 36534611 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02304 21 323 Receptor kinase-like Gene Family AT1G53430 56.678 3.52e-112 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car07g02304 Pkinase 2e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02304 07 36527071 36534611 Car07g02304 07 36527071 36534611 ECH