Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02286 ATGAGAAGAATCCCGTTTCTGCTACTGAAACAACGACCTTCACTTTCAACCATTTCAAAAATCTCCCTTTCCTTTCCCCTTCCTCAGCCCCTCCAAACACAATCCCCACCTTCACATTCATTCCTTCGCTCCTTCAAATCCCTACCTCTCCCTCCCCCAGAACTCGTCGAACCCTATTGCGACCTCTCCGACGTCGTTTCCTCAAAACAAAACCTCCAACCTTCCCCATGGTTCACTCAAATCCTCAACCTCCTCGACAATTCCCCAACAATGGAATTAAATCTCAACTCCTTCTGCCAACAATTCCTCATCACACTCTCTCCTTCCTTCGTCGCTCACACTCTCCGCTCCCTCAACAACCATCACACCGCCCTCCGTTTCTTCAATTGGGCTTCCAACCAAAACAACTATTCTCATTCCCTCGATTGCTACGTTTCCCTCATTAACCTCCTCCTCTCTCCCTCCGCTACTACCACCACCACAACCGCAGCCGCTTTAAATATATTCGCCGAATTACGACATAACCGCCTCCCGCTTACTCCCCCGGCTGCCAACTCCCTAATCAAAAGCTTCGGTAACGCCGGCTTAGTCGAAGAGCTTTTATCAGTTTGGCGTGGAATGAACGAACAAAACATCCAACCCACTCTGTTCACTTATAATTCGCTTCTTAACGGACTCGTTGGTTCCTCTCTTGTCGAATCAGCAGAGCGTGTTTTCGACGCCATGAAAGAAGGAAGAACAAAGCCTGATGTTGTAACCTACAATACTTTGATTAAAGGTTATTGTAAAGTGGGGAAAACGCGCAAGGCGATTGAGATGGTTCGTGAAATGGAGGTAATTAATTTGGAGCCTGATGTTGTTACTTATTTGACAATAATGCAGGCttgttatgttgaaggtgattttgattgttgtttgAGTCTTTACCATGAGATGGAGGATAAAGGATTAGAGGTTCCTTCTCATGGTTATAGTTTGGTGATTTGTGGACTTTGTAAAATGGGGAAGGTTTTGGAAGCTTATGCTTTGTTTGAGAATATGATTAGGAATGGTTGTAAGGGTAATAAAGCTGTTTACACTGCTCTGATTGATTGTTATGGGAAGAGTGGGAATTCTGATGGTGCTTTGAGGTTGCTTGAGAGGATGAAAATGGATGGGATTGAATCTGATGAGGTTACTTATGGTGCTATTGTTAATGGATTGTGTAAGAGTGGGAGAGTCGAGGAAGCTTTGTGTTATTTTCAGTTTTGTAATGAGAATGGTATTGTTGTTAATGCTGTGTTTTATTCGAGTTTGATAGATGGACTTGGTAAGGCAGGGAGGGTTGATGAAGCTGAGAAGGTGTTTGATGAAATGTCTGTGAAGGGATGTCCGCCAGATTCCTATTGCTATAATGCGCTCATAGATGGATTGTGTAAATGTGGGAGGATTGATGATGCTCTTGCATTGTTTAAGAGGATGGAGTGCGATGGTTGTGAGCAGACTGTGTATACATTTACTATATTCATTAGTGAGCTTTTCAGGGAGCGTAGGAATGAAGAGGCAATGAAGATGTGGGATTTGATGATTGACAAAGGGATAACGCCGAATGTAGCTTGTTTCAGGGCTCTTTCGATTGGATTGTGTCTTTCGGGTAAGGTTGCAAGGGCTTGTAAAGTGTTGGACGAGCTTGCACCTATGGGGGTTGTTCTTGAAATGGCTTATGAAGATATGATTGGAGCGCTGTGTAAAGCTGGACGAGTGAAGGAGGCTTGTAAATTGGCTGATGGAATTGTGGACAGGGGTAGAGAAATACCTGGGAAAGTTAGGACTGTGATGATTCATTCCTTGAGGAAAGCTGGGAATGCTGATTTGGCTATCAAATTGATGCATAGTAAGATTGGTATTGGGTATGAACGAATGAGGAGTGTTAAAAAGAGAGTCAAGTTTCAAACCCTTCTTGACAATTGA 1950 0.4303 MRRIPFLLLKQRPSLSTISKISLSFPLPQPLQTQSPPSHSFLRSFKSLPLPPPELVEPYCDLSDVVSSKQNLQPSPWFTQILNLLDNSPTMELNLNSFCQQFLITLSPSFVAHTLRSLNNHHTALRFFNWASNQNNYSHSLDCYVSLINLLLSPSATTTTTTAAALNIFAELRHNRLPLTPPAANSLIKSFGNAGLVEELLSVWRGMNEQNIQPTLFTYNSLLNGLVGSSLVESAERVFDAMKEGRTKPDVVTYNTLIKGYCKVGKTRKAIEMVREMEVINLEPDVVTYLTIMQACYVEGDFDCCLSLYHEMEDKGLEVPSHGYSLVICGLCKMGKVLEAYALFENMIRNGCKGNKAVYTALIDCYGKSGNSDGALRLLERMKMDGIESDEVTYGAIVNGLCKSGRVEEALCYFQFCNENGIVVNAVFYSSLIDGLGKAGRVDEAEKVFDEMSVKGCPPDSYCYNALIDGLCKCGRIDDALALFKRMECDGCEQTVYTFTIFISELFRERRNEEAMKMWDLMIDKGITPNVACFRALSIGLCLSGKVARACKVLDELAPMGVVLEMAYEDMIGALCKAGRVKEACKLADGIVDRGREIPGKVRTVMIHSLRKAGNADLAIKLMHSKIGIGYERMRSVKKRVKFQTLLDN 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02286 649 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 390 424 IPR002885 -
Car07g02286 649 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 180 214 IPR002885 -
Car07g02286 649 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 285 319 IPR002885 -
Car07g02286 649 Pfam Pentatricopeptide repeat domain 483 537 IPR002885 -
Car07g02286 649 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 215 249 IPR002885 -
Car07g02286 649 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL 38 648 - -
Car07g02286 649 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 460 494 IPR002885 -
Car07g02286 649 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 425 459 IPR002885 -
Car07g02286 649 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL 38 648 - -
Car07g02286 649 Gene3D Tetratricopeptide repeat domain 113 278 IPR011990 GO:0005515
Car07g02286 649 SUPERFAMILY HCP-like 285 486 - -
Car07g02286 649 TIGRFAM PPR: pentatricopeptide repeat domain 497 531 IPR002885 -
Car07g02286 649 TIGRFAM PPR: pentatricopeptide repeat domain 358 390 IPR002885 -
Car07g02286 649 TIGRFAM PPR: pentatricopeptide repeat domain 287 318 IPR002885 -
Car07g02286 649 TIGRFAM PPR: pentatricopeptide repeat domain 217 251 IPR002885 -
Car07g02286 649 TIGRFAM PPR: pentatricopeptide repeat domain 252 285 IPR002885 -
Car07g02286 649 TIGRFAM PPR: pentatricopeptide repeat domain 429 461 IPR002885 -
Car07g02286 649 TIGRFAM PPR: pentatricopeptide repeat domain 392 423 IPR002885 -
Car07g02286 649 TIGRFAM PPR: pentatricopeptide repeat domain 324 355 IPR002885 -
Car07g02286 649 TIGRFAM PPR: pentatricopeptide repeat domain 462 493 IPR002885 -
Car07g02286 649 TIGRFAM PPR: pentatricopeptide repeat domain 185 215 IPR002885 -
Car07g02286 649 Pfam PPR repeat family 185 226 IPR002885 -
Car07g02286 649 Pfam PPR repeat family 357 403 IPR002885 -
Car07g02286 649 Pfam PPR repeat family 249 296 IPR002885 -
Car07g02286 649 Pfam PPR repeat family 425 473 IPR002885 -
Car07g02286 649 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 320 354 IPR002885 -
Car07g02286 649 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 355 389 IPR002885 -
Car07g02286 649 Gene3D Tetratricopeptide repeat domain 488 562 IPR011990 GO:0005515
Car07g02286 649 Gene3D Tetratricopeptide repeat domain 349 415 IPR011990 GO:0005515
Car07g02286 649 Gene3D Tetratricopeptide repeat domain 564 626 IPR011990 GO:0005515
Car07g02286 649 Gene3D Tetratricopeptide repeat domain 279 348 IPR011990 GO:0005515
Car07g02286 649 Gene3D Tetratricopeptide repeat domain 416 487 IPR011990 GO:0005515
Car07g02286 649 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 250 284 IPR002885 -
Car07g02286 649 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 495 529 IPR002885 -
Car07g02286 649 Pfam PPR repeat 324 352 IPR002885 -
Car07g02286 649 Pfam PPR repeat 571 592 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02286 227 632 Glycosyltransferase AT1G05670 27.494 1.42e-40 156